Literature DB >> 11751576

The processivity factor beta controls DNA polymerase IV traffic during spontaneous mutagenesis and translesion synthesis in vivo.

Nathalie Lenne-Samuel1, Jérôme Wagner, Hélène Etienne, Robert P P Fuchs.   

Abstract

The dinB-encoded DNA polymerase IV (Pol IV) belongs to the recently identified Y-family of DNA polymerases. Like other members of this family, Pol IV is involved in translesion synthesis and mutagenesis. Here, we show that the C-terminal five amino acids of Pol IV are essential in targeting it to the beta-clamp, the processivity factor of the replicative DNA polymerase (Pol III) of Escherichia coli. In vivo, the disruption of this interaction obliterates the function of Pol IV in both spontaneous and induced mutagenesis. These results point to the pivotal role of the processivity clamp during DNA polymerase trafficking in the vicinity of damaged-template DNA.

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Year:  2001        PMID: 11751576      PMCID: PMC1083926          DOI: 10.1093/embo-reports/kvf007

Source DB:  PubMed          Journal:  EMBO Rep        ISSN: 1469-221X            Impact factor:   8.807


  23 in total

1.  The many faces of DNA polymerases: strategies for mutagenesis and for mutational avoidance.

Authors:  E C Friedberg; W J Feaver; V L Gerlach
Journal:  Proc Natl Acad Sci U S A       Date:  2000-05-23       Impact factor: 11.205

2.  Building a replisome from interacting pieces: sliding clamp complexed to a peptide from DNA polymerase and a polymerase editing complex.

Authors:  Y Shamoo; T A Steitz
Journal:  Cell       Date:  1999-10-15       Impact factor: 41.582

3.  Mechanism of the sliding beta-clamp of DNA polymerase III holoenzyme.

Authors:  P T Stukenberg; P S Studwell-Vaughan; M O'Donnell
Journal:  J Biol Chem       Date:  1991-06-15       Impact factor: 5.157

4.  Fidelity of Escherichia coli DNA polymerase III holoenzyme. The effects of beta, gamma complex processivity proteins and epsilon proofreading exonuclease on nucleotide misincorporation efficiencies.

Authors:  L B Bloom; X Chen; D K Fygenson; J Turner; M O'Donnell; M F Goodman
Journal:  J Biol Chem       Date:  1997-10-31       Impact factor: 5.157

5.  Roles of E. coli DNA polymerases IV and V in lesion-targeted and untargeted SOS mutagenesis.

Authors:  M Tang; P Pham; X Shen; J S Taylor; M O'Donnell; R Woodgate; M F Goodman
Journal:  Nature       Date:  2000-04-27       Impact factor: 49.962

6.  Escherichia coli DNA polymerase IV mutator activity: genetic requirements and mutational specificity.

Authors:  J Wagner; T Nohmi
Journal:  J Bacteriol       Date:  2000-08       Impact factor: 3.490

7.  Cellular strategies for accommodating replication-hindering adducts in DNA: control by the SOS response in Escherichia coli.

Authors:  N Koffel-Schwartz; F Coin; X Veaute; R P Fuchs
Journal:  Proc Natl Acad Sci U S A       Date:  1996-07-23       Impact factor: 11.205

8.  The dinB gene encodes a novel E. coli DNA polymerase, DNA pol IV, involved in mutagenesis.

Authors:  J Wagner; P Gruz; S R Kim; M Yamada; K Matsui; R P Fuchs; T Nohmi
Journal:  Mol Cell       Date:  1999-08       Impact factor: 17.970

9.  Multiple pathways for SOS-induced mutagenesis in Escherichia coli: an overexpression of dinB/dinP results in strongly enhancing mutagenesis in the absence of any exogenous treatment to damage DNA.

Authors:  S R Kim; G Maenhaut-Michel; M Yamada; Y Yamamoto; K Matsui; T Sofuni; T Nohmi; H Ohmori
Journal:  Proc Natl Acad Sci U S A       Date:  1997-12-09       Impact factor: 11.205

10.  Processive DNA synthesis by DNA polymerase II mediated by DNA polymerase III accessory proteins.

Authors:  C A Bonner; P T Stukenberg; M Rajagopalan; R Eritja; M O'Donnell; K McEntee; H Echols; M F Goodman
Journal:  J Biol Chem       Date:  1992-06-05       Impact factor: 5.157

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  43 in total

Review 1.  DNA replication fidelity in Escherichia coli: a multi-DNA polymerase affair.

Authors:  Iwona J Fijalkowska; Roel M Schaaper; Piotr Jonczyk
Journal:  FEMS Microbiol Rev       Date:  2012-04-05       Impact factor: 16.408

2.  A peptide switch regulates DNA polymerase processivity.

Authors:  Francisco J López de Saro; Roxana E Georgescu; Mike O'Donnell
Journal:  Proc Natl Acad Sci U S A       Date:  2003-11-20       Impact factor: 11.205

3.  Competitive processivity-clamp usage by DNA polymerases during DNA replication and repair.

Authors:  Francisco J López de Saro; Roxana E Georgescu; Myron F Goodman; Mike O'Donnell
Journal:  EMBO J       Date:  2003-12-01       Impact factor: 11.598

4.  Structural basis for recruitment of translesion DNA polymerase Pol IV/DinB to the beta-clamp.

Authors:  Karen A Bunting; S Mark Roe; Laurence H Pearl
Journal:  EMBO J       Date:  2003-11-03       Impact factor: 11.598

5.  Protein trafficking on sliding clamps.

Authors:  Francisco López de Saro; Roxana E Georgescu; Frank Leu; Mike O'Donnell
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2004-01-29       Impact factor: 6.237

6.  Defining the position of the switches between replicative and bypass DNA polymerases.

Authors:  Shingo Fujii; Robert P Fuchs
Journal:  EMBO J       Date:  2004-10-07       Impact factor: 11.598

7.  The Escherichia coli dnaN159 mutant displays altered DNA polymerase usage and chronic SOS induction.

Authors:  Mark D Sutton
Journal:  J Bacteriol       Date:  2004-10       Impact factor: 3.490

8.  Error-prone DNA polymerase IV is regulated by the heat shock chaperone GroE in Escherichia coli.

Authors:  Jill C Layton; Patricia L Foster
Journal:  J Bacteriol       Date:  2005-01       Impact factor: 3.490

9.  A dynamic polymerase exchange with Escherichia coli DNA polymerase IV replacing DNA polymerase III on the sliding clamp.

Authors:  Asako Furukohri; Myron F Goodman; Hisaji Maki
Journal:  J Biol Chem       Date:  2008-02-28       Impact factor: 5.157

10.  The active form of DNA polymerase V is UmuD'(2)C-RecA-ATP.

Authors:  Qingfei Jiang; Kiyonobu Karata; Roger Woodgate; Michael M Cox; Myron F Goodman
Journal:  Nature       Date:  2009-07-16       Impact factor: 49.962

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