Literature DB >> 19588986

Measurements of heme relaxation and ligand recombination in strong magnetic fields.

Zhenyu Zhang1, Abdelkrim Benabbas, Xiong Ye, Anchi Yu, Paul M Champion.   

Abstract

Heme cooling signals and diatomic ligand recombination kinetics are measured in strong magnetic fields (up to 10 T). We examined diatomic ligand recombination to heme model compounds (NO and CO), myoglobin (NO and O(2)), and horseradish peroxidase (NO). No magnetic field induced rate changes in any of the samples were observed within the experimental detection limit. However, in the case of CO binding to heme in glycerol and O(2) binding to myoglobin, we observe a small magnetic field dependent change in the early time amplitude of the optical response that is assigned to heme cooling. One possibility, consistent with this observation, is that there is a weak magnetic field dependence of the nonradiative branching ratio into the vibrationally hot electronic ground state during CO photolysis. Ancillary studies of the "spin-forbidden" CO binding reaction in a variety of heme compounds in the absence of magnetic field demonstrate a surprisingly wide range for the Arrhenius prefactor. We conclude that CO binding to heme is not always retarded by unfavorable spin selection rules involving a double spin-flip superexchange mechanism. In fact, it appears that the small prefactor ( approximately 10(9) s(-1)) found for CO rebinding to Mb may be anomalous, rather than the general rule for heme-CO rebinding. These results point to unresolved fundamental issues that underlie the theory of heme-ligand photolysis and rebinding.

Entities:  

Mesh:

Substances:

Year:  2009        PMID: 19588986      PMCID: PMC2736360          DOI: 10.1021/jp9031805

Source DB:  PubMed          Journal:  J Phys Chem B        ISSN: 1520-5207            Impact factor:   2.991


  49 in total

1.  Dissociation and recombination between ligands and heme in a CO-sensing transcriptional activator CooA. A flash photolysis study.

Authors:  S Kumazaki; H Nakajima; T Sakaguchi; E Nakagawa; H Shinohara; K Yoshihara; S Aono
Journal:  J Biol Chem       Date:  2000-12-08       Impact factor: 5.157

2.  NATURE OF THE IRON-OXYGEN BOND IN OXYHAEMOGLOBIN.

Authors:  J J WEISS
Journal:  Nature       Date:  1964-04-04       Impact factor: 49.962

3.  Coherence spectroscopy investigations of the low-frequency vibrations of heme: effects of protein-specific perturbations.

Authors:  Flaviu Gruia; Minoru Kubo; Xiong Ye; Dan Ionascu; Changyuan Lu; Robert K Poole; Syun-Ru Yeh; Paul M Champion
Journal:  J Am Chem Soc       Date:  2008-03-20       Impact factor: 15.419

4.  Direct observations of ligand dynamics in hemoglobin by subpicosecond infrared spectroscopy.

Authors:  P A Anfinrud; C Han; R M Hochstrasser
Journal:  Proc Natl Acad Sci U S A       Date:  1989-11       Impact factor: 11.205

5.  Spin-dependent mechanism for diatomic ligand binding to heme.

Authors:  Stefan Franzen
Journal:  Proc Natl Acad Sci U S A       Date:  2002-12-11       Impact factor: 11.205

6.  CO recombination to human myoglobin mutants in glycerol-water solutions.

Authors:  S Balasubramanian; D G Lambright; M C Marden; S G Boxer
Journal:  Biochemistry       Date:  1993-03-09       Impact factor: 3.162

7.  Crystal structures of CO-, deoxy- and met-myoglobins at various pH values.

Authors:  F Yang; G N Phillips
Journal:  J Mol Biol       Date:  1996-03-08       Impact factor: 5.469

8.  Subpicosecond oxygen trapping in the heme pocket of the oxygen sensor FixL observed by time-resolved resonance Raman spectroscopy.

Authors:  Sergei G Kruglik; Audrius Jasaitis; Klara Hola; Taku Yamashita; Ursula Liebl; Jean-Louis Martin; Marten H Vos
Journal:  Proc Natl Acad Sci U S A       Date:  2007-04-19       Impact factor: 11.205

9.  Geminate recombination of diatomic ligands CO, O2, and NO with myoglobin.

Authors:  K N Walda; X Y Liu; V S Sharma; D Magde
Journal:  Biochemistry       Date:  1994-03-01       Impact factor: 3.162

10.  Ozone model for bonding of an O2 to heme in oxyhemoglobin.

Authors:  W A Goddard; B D Olafson
Journal:  Proc Natl Acad Sci U S A       Date:  1975-06       Impact factor: 11.205

View more
  5 in total

1.  Effect of DNA binding on geminate CO recombination kinetics in CO-sensing transcription factor CooA.

Authors:  Abdelkrim Benabbas; Venugopal Karunakaran; Hwan Youn; Thomas L Poulos; Paul M Champion
Journal:  J Biol Chem       Date:  2012-04-28       Impact factor: 5.157

2.  Blocking the gate to ligand entry in human hemoglobin.

Authors:  Ivan Birukou; Jayashree Soman; John S Olson
Journal:  J Biol Chem       Date:  2010-12-29       Impact factor: 5.157

3.  Investigations of low-frequency vibrational dynamics and ligand binding kinetics of cystathionine beta-synthase.

Authors:  Venugopal Karunakaran; Abdelkrim Benabbas; Yuhan Sun; Zhenyu Zhang; Sangita Singh; Ruma Banerjee; Paul M Champion
Journal:  J Phys Chem B       Date:  2010-03-11       Impact factor: 2.991

4.  Ultrafast dynamics of diatomic ligand binding to nitrophorin 4.

Authors:  Abdelkrim Benabbas; Xiong Ye; Minoru Kubo; Zhenyu Zhang; Estelle M Maes; William R Montfort; Paul M Champion
Journal:  J Am Chem Soc       Date:  2010-03-03       Impact factor: 15.419

5.  Ultrafast CO Kinetics in Heme Proteins: Adiabatic Ligand Binding and Heavy Atom Tunneling.

Authors:  Abdelkrim Benabbas; Yuhan Sun; Thomas L Poulos; Paul M Champion
Journal:  J Am Chem Soc       Date:  2017-10-24       Impact factor: 15.419

  5 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.