Literature DB >> 2554314

Direct observations of ligand dynamics in hemoglobin by subpicosecond infrared spectroscopy.

P A Anfinrud1, C Han, R M Hochstrasser.   

Abstract

The photodissociation of CO from HbCO at ambient temperature is studied by means of a femtosecond IR technique. The bleaching of the FeCO absorption and the appearance of a new IR absorption near that of free CO are both observed at 300 fs after optical excitation. The bleach does not recover on the time scale of a few picoseconds but does recover by approximately 4% within 1 ns, which suggests that a barrier to recombination is formed within a few picoseconds. The CO spectrum does not change significantly between 300 fs and 1 ns, suggesting that the CO quickly finds some locations in the heme pocket that are not more than a few angstroms from the iron. The de-ligated CO appears in its ground vibrational level. There is evidence that 85 +/- 10% of this CO remains in the heme pocket at 1 ns; it probably resides there for 50 ns. The flow of excess vibrational energy from the heme to the solvent was directly observed in the IR experiments. The heme cools within 1-2 ps while thermal disruption of the surrounding solvent structure requires approximately 30 ps.

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Year:  1989        PMID: 2554314      PMCID: PMC298287          DOI: 10.1073/pnas.86.21.8387

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  24 in total

1.  Ligand binding to heme proteins: relevance of low-temperature data.

Authors:  A Ansari; E E DiIorio; D D Dlott; H Frauenfelder; I E Iben; P Langer; H Roder; T B Sauke; E Shyamsunder
Journal:  Biochemistry       Date:  1986-06-03       Impact factor: 3.162

2.  Dynamics of ligand binding to heme proteins.

Authors:  D A Case; M Karplus
Journal:  J Mol Biol       Date:  1979-08-15       Impact factor: 5.469

3.  Ultrafast relaxation in picosecond photolysis of nitrosylhemoglobin.

Authors:  P A Cornelius; R M Hochstrasser; A W Steele
Journal:  J Mol Biol       Date:  1983-01-05       Impact factor: 5.469

4.  Structures of photolyzed carboxymyoglobin.

Authors:  F G Fiamingo; J O Alben
Journal:  Biochemistry       Date:  1985-12-31       Impact factor: 3.162

5.  Femtosecond photolysis of CO-ligated protoheme and hemoproteins: appearance of deoxy species with a 350-fsec time constant.

Authors:  J L Martin; A Migus; C Poyart; Y Lecarpentier; R Astier; A Antonetti
Journal:  Proc Natl Acad Sci U S A       Date:  1983-01       Impact factor: 11.205

6.  Nanosecond absorption spectroscopy of hemoglobin: elementary processes in kinetic cooperativity.

Authors:  J Hofrichter; J H Sommer; E R Henry; W A Eaton
Journal:  Proc Natl Acad Sci U S A       Date:  1983-04       Impact factor: 11.205

7.  Infrared spectroscopy of photodissociated carboxymyoglobin at low temperatures.

Authors:  J O Alben; D Beece; S F Bowne; W Doster; L Eisenstein; H Frauenfelder; D Good; J D McDonald; M C Marden; P P Moh; L Reinisch; A H Reynolds; E Shyamsunder; K T Yue
Journal:  Proc Natl Acad Sci U S A       Date:  1982-06       Impact factor: 11.205

8.  Photophysics and reactivity of heme proteins: a femtosecond absorption study of hemoglobin, myoglobin, and protoheme.

Authors:  J W Petrich; C Poyart; J L Martin
Journal:  Biochemistry       Date:  1988-05-31       Impact factor: 3.162

9.  Molecular dynamics simulation of photodissociation of carbon monoxide from hemoglobin.

Authors:  E R Henry; M Levitt; W A Eaton
Journal:  Proc Natl Acad Sci U S A       Date:  1985-04       Impact factor: 11.205

10.  Picosecond time-resolved resonance Raman studies of hemoglobin: implications for reactivity.

Authors:  E W Findsen; J M Friedman; M R Ondrias; S R Simon
Journal:  Science       Date:  1985-08-16       Impact factor: 47.728

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  32 in total

1.  Stability and folding dynamics of polyglutamic acid.

Authors:  Carsten Krejtschi; Karin Hauser
Journal:  Eur Biophys J       Date:  2011-01-28       Impact factor: 1.733

2.  The assignment of the different infrared continuum absorbance changes observed in the 3000-1800-cm(-1) region during the bacteriorhodopsin photocycle.

Authors:  Florian Garczarek; Jianping Wang; Mostafa A El-Sayed; Klaus Gerwert
Journal:  Biophys J       Date:  2004-08-06       Impact factor: 4.033

3.  Protein structural dynamics in solution unveiled via 100-ps time-resolved x-ray scattering.

Authors:  Hyun Sun Cho; Naranbaatar Dashdorj; Friedrich Schotte; Timothy Graber; Robert Henning; Philip Anfinrud
Journal:  Proc Natl Acad Sci U S A       Date:  2010-04-06       Impact factor: 11.205

4.  Temperature-dependent studies of NO recombination to heme and heme proteins.

Authors:  Dan Ionascu; Flaviu Gruia; Xiong Ye; Anchi Yu; Florin Rosca; Chris Beck; Andrey Demidov; John S Olson; Paul M Champion
Journal:  J Am Chem Soc       Date:  2005-12-07       Impact factor: 15.419

5.  Direct observation of ligand transfer and bond formation in cytochrome c oxidase by using mid-infrared chirped-pulse upconversion.

Authors:  Johanne Treuffet; Kevin J Kubarych; Jean-Christophe Lambry; Eric Pilet; Jean-Baptiste Masson; Jean-Louis Martin; Marten H Vos; Manuel Joffre; Antigoni Alexandrou
Journal:  Proc Natl Acad Sci U S A       Date:  2007-09-25       Impact factor: 11.205

6.  Time-resolved magnetic circular dichroism spectroscopy of photolyzed carbonmonoxy cytochrome c oxidase (cytochrome aa3).

Authors:  R A Goldbeck; T D Dawes; O Einarsdóttir; W H Woodruff; D S Kliger
Journal:  Biophys J       Date:  1991-07       Impact factor: 4.033

7.  Nonequilibrium dynamics of helix reorganization observed by transient 2D IR spectroscopy.

Authors:  Matthew J Tucker; Mohannad Abdo; Joel R Courter; Jianxin Chen; Stephen P Brown; Amos B Smith; Robin M Hochstrasser
Journal:  Proc Natl Acad Sci U S A       Date:  2013-10-08       Impact factor: 11.205

8.  Residue-specific structural kinetics of proteins through the union of isotope labeling, mid-IR pulse shaping, and coherent 2D IR spectroscopy.

Authors:  Chris T Middleton; Ann Marie Woys; Sudipta S Mukherjee; Martin T Zanni
Journal:  Methods       Date:  2010-05-22       Impact factor: 3.608

9.  Using empirical phase diagrams to understand the role of intramolecular dynamics in immunoglobulin G stability.

Authors:  Joshua D Ramsey; Michelle L Gill; Tim J Kamerzell; E Shane Price; Sangeeta B Joshi; Steven M Bishop; Cynthia N Oliver; C Russell Middaugh
Journal:  J Pharm Sci       Date:  2009-07       Impact factor: 3.534

10.  His26 protonation in cytochrome c triggers microsecond β-sheet formation and heme exposure: implications for apoptosis.

Authors:  Gurusamy Balakrishnan; Ying Hu; Thomas G Spiro
Journal:  J Am Chem Soc       Date:  2012-11-06       Impact factor: 15.419

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