Literature DB >> 19343510

The NemaGENETAG initiative: large scale transposon insertion gene-tagging in Caenorhabditis elegans.

Daphne Bazopoulou1, Nektarios Tavernarakis.   

Abstract

The nematode Caenorhabditis elegans is a widely appreciated, powerful platform in which to study important biological mechanisms related to human health. More than 65% of human disease genes have homologues in the C. elegans genome, and essential aspects of mammalian cell biology, neurobiology and development are faithfully recapitulated in this organism. The EU-funded NemaGENETAG project was initiated with the aim to develop cutting-edge tools and resources that will facilitate modelling of human pathologies in C. elegans, and advance our understanding of animal development and physiology. The main objective of the project involves the generation and evaluation of a large collection of transposon-tagged mutants. In the process of achieving this objective the NemaGENETAG consortium also endeavours to optimize and automate existing transposon-mediated mutagenesis methodologies based on the Mos1 transposable element, in addition to developing alternatives using other transposon systems. The final product of this initiative-a comprehensive collection of transposon-tagged alleles-together with the acquisition of efficient transposon-based tools for mutagenesis and transgenesis in C. elegans, should yield a wealth of information on gene function, immediately relevant to key biological processes and to pharmaceutical research and development.

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Year:  2009        PMID: 19343510     DOI: 10.1007/s10709-009-9361-3

Source DB:  PubMed          Journal:  Genetica        ISSN: 0016-6707            Impact factor:   1.082


  60 in total

1.  Minos transposon causes germline transgenesis of the ascidian Ciona savignyi.

Authors:  Terumi Matsuoka; Satoko Awazu; Nori Satoh; Yasunori Sasakura
Journal:  Dev Growth Differ       Date:  2004-06       Impact factor: 2.053

2.  Genetic dissection of neural circuits by Tol2 transposon-mediated Gal4 gene and enhancer trapping in zebrafish.

Authors:  Kazuhide Asakawa; Maximiliano L Suster; Kanta Mizusawa; Saori Nagayoshi; Tomoya Kotani; Akihiro Urasaki; Yasuyuki Kishimoto; Masahiko Hibi; Koichi Kawakami
Journal:  Proc Natl Acad Sci U S A       Date:  2008-01-17       Impact factor: 11.205

3.  Germline transformation of the silkworm Bombyx mori L. using a piggyBac transposon-derived vector.

Authors:  T Tamura; C Thibert; C Royer; T Kanda; E Abraham; M Kamba; N Komoto; J L Thomas; B Mauchamp; G Chavancy; P Shirk; M Fraser; J C Prudhomme; P Couble; T Toshiki; T Chantal; R Corinne; K Toshio; A Eappen; K Mari; K Natuo; T Jean-Luc; M Bernard; C Gérard; S Paul; F Malcolm; P Jean-Claude; C Pierre
Journal:  Nat Biotechnol       Date:  2000-01       Impact factor: 54.908

4.  Mobility of the piggyBac transposon in embryos of the vectors of Dengue fever (Aedes albopictus) and La Crosse encephalitis (Ae. triseriatus).

Authors:  N Lobo; X Li; A Hua-Van; M J Fraser
Journal:  Mol Genet Genomics       Date:  2001-03       Impact factor: 3.291

Review 5.  Insertional mutagenesis in C. elegans using the Drosophila transposon Mos1: a method for the rapid identification of mutated genes.

Authors:  Jean-Louis Bessereau
Journal:  Methods Mol Biol       Date:  2006

6.  The piggyBac element is capable of precise excision and transposition in cells and embryos of the mosquito, Anopheles gambiae.

Authors:  G L Grossman; C S Rafferty; M J Fraser; M Q Benedict
Journal:  Insect Biochem Mol Biol       Date:  2000-10       Impact factor: 4.714

7.  Efficient transformation of the beetle Tribolium castaneum using the Minos transposable element: quantitative and qualitative analysis of genomic integration events.

Authors:  Anastasios Pavlopoulos; Andreas J Berghammer; Michalis Averof; Martin Klingler
Journal:  Genetics       Date:  2004-06       Impact factor: 4.562

8.  Gene transfer into the medfly, Ceratitis capitata, with a Drosophila hydei transposable element.

Authors:  T G Loukeris; I Livadaras; B Arcà; S Zabalou; C Savakis
Journal:  Science       Date:  1995-12-22       Impact factor: 47.728

9.  Extrachromosomal transposition of the transposable element Minos in embryos of the cricket Gryllus bimaculatus.

Authors:  Hongjie Zhang; Yohei Shinmyo; Ayumi Hirose; Taro Mito; Yoshiko Inoue; Hideyo Ohuchi; Thanasis G Loukeris; Paul Eggleston; Sumihare Noji
Journal:  Dev Growth Differ       Date:  2002-10       Impact factor: 2.053

10.  The lepidopteran transposon vector, piggyBac, mediates germ-line transformation in the Mediterranean fruit fly.

Authors:  A M Handler; S D McCombs; M J Fraser; S H Saul
Journal:  Proc Natl Acad Sci U S A       Date:  1998-06-23       Impact factor: 11.205

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  22 in total

Review 1.  The early bird catches the worm: new technologies for the Caenorhabditis elegans toolkit.

Authors:  Xiao Xu; Stuart K Kim
Journal:  Nat Rev Genet       Date:  2011-10-04       Impact factor: 53.242

Review 2.  Reverse genetics in eukaryotes.

Authors:  Serge Hardy; Vincent Legagneux; Yann Audic; Luc Paillard
Journal:  Biol Cell       Date:  2010-10       Impact factor: 4.458

3.  An antibiotic selection marker for nematode transgenesis.

Authors:  Rosina Giordano-Santini; Stuart Milstein; Nenad Svrzikapa; Domena Tu; Robert Johnsen; David Baillie; Marc Vidal; Denis Dupuy
Journal:  Nat Methods       Date:  2010-08-22       Impact factor: 28.547

4.  Knock it down, switch it on.

Authors:  Jean-Louis Bessereau
Journal:  Nat Methods       Date:  2010-06       Impact factor: 28.547

Review 5.  From genes to function: the C. elegans genetic toolbox.

Authors:  Thomas Boulin; Oliver Hobert
Journal:  Wiley Interdiscip Rev Dev Biol       Date:  2011-11-28       Impact factor: 5.814

Review 6.  Exciting prospects for precise engineering of Caenorhabditis elegans genomes with CRISPR/Cas9.

Authors:  Christian Frøkjær-Jensen
Journal:  Genetics       Date:  2013-11       Impact factor: 4.562

Review 7.  Transposon-based screens for cancer gene discovery in mouse models.

Authors:  Adam J Dupuy
Journal:  Semin Cancer Biol       Date:  2010-05-15       Impact factor: 15.707

8.  The Drosophila gene disruption project: progress using transposons with distinctive site specificities.

Authors:  Hugo J Bellen; Robert W Levis; Yuchun He; Joseph W Carlson; Martha Evans-Holm; Eunkyung Bae; Jaeseob Kim; Athanasios Metaxakis; Charalambos Savakis; Karen L Schulze; Roger A Hoskins; Allan C Spradling
Journal:  Genetics       Date:  2011-04-21       Impact factor: 4.562

Review 9.  Forward and reverse mutagenesis in C. elegans.

Authors:  Lena M Kutscher; Shai Shaham
Journal:  WormBook       Date:  2014-01-17

10.  Targeted gene deletions in C. elegans using transposon excision.

Authors:  Christian Frøkjaer-Jensen; M Wayne Davis; Gunther Hollopeter; Jon Taylor; Todd W Harris; Paola Nix; Rachel Lofgren; Michael Prestgard-Duke; Michael Bastiani; Donald G Moerman; Erik M Jorgensen
Journal:  Nat Methods       Date:  2010-04-25       Impact factor: 28.547

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