Literature DB >> 19218435

The minimum information principle and its application to neural code analysis.

Amir Globerson1, Eran Stark, Eilon Vaadia, Naftali Tishby.   

Abstract

The study of complex information processing systems requires appropriate theoretical tools to help unravel their underlying design principles. Information theory is one such tool, and has been utilized extensively in the study of the neural code. Although much progress has been made in information theoretic methodology, there is still no satisfying answer to the question: "What is the information that a given property of the neural population activity (e.g., the responses of single cells within the population) carries about a set of stimuli?" Here, we answer such questions via the minimum mutual information (MinMI) principle. We quantify the information in any statistical property of the neural response by considering all hypothetical neuronal populations that have the given property and finding the one that contains the minimum information about the stimuli. All systems with higher information values necessarily contain additional information processing mechanisms and, thus, the minimum captures the information related to the given property alone. MinMI may be used to measure information in properties of the neural response, such as that conveyed by responses of small subsets of cells (e.g., singles or pairs) in a large population and cooperative effects between subunits in networks. We show how the framework can be used to study neural coding in large populations and to reveal properties that are not discovered by other information theoretic methods.

Mesh:

Year:  2009        PMID: 19218435      PMCID: PMC2651257          DOI: 10.1073/pnas.0806782106

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  22 in total

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Authors:  L Martignon; G Deco; K Laskey; M Diamond; W Freiwald; E Vaadia
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Authors:  G Pola; A Thiele; K P Hoffmann; S Panzeri
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3.  Decoding neuronal spike trains: how important are correlations?

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Journal:  Proc Natl Acad Sci U S A       Date:  2003-05-29       Impact factor: 11.205

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5.  Network information and connected correlations.

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Journal:  Phys Rev Lett       Date:  2003-12-02       Impact factor: 9.161

6.  Reading a neural code.

Authors:  W Bialek; F Rieke; R R de Ruyter van Steveninck; D Warland
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Journal:  Mol Biol Cell       Date:  2000-12       Impact factor: 4.138

8.  Temporal encoding of two-dimensional patterns by single units in primate inferior temporal cortex. III. Information theoretic analysis.

Authors:  L M Optican; B J Richmond
Journal:  J Neurophysiol       Date:  1987-01       Impact factor: 2.714

9.  How independent are the messages carried by adjacent inferior temporal cortical neurons?

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10.  Time course of information about motion direction in visual area MT of macaque monkeys.

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  13 in total

1.  Central auditory neurons have composite receptive fields.

Authors:  Andrei S Kozlov; Timothy Q Gentner
Journal:  Proc Natl Acad Sci U S A       Date:  2016-01-19       Impact factor: 11.205

Review 2.  Synergy, redundancy, and multivariate information measures: an experimentalist's perspective.

Authors:  Nicholas Timme; Wesley Alford; Benjamin Flecker; John M Beggs
Journal:  J Comput Neurosci       Date:  2013-07-03       Impact factor: 1.621

Review 3.  Computational identification of receptive fields.

Authors:  Tatyana O Sharpee
Journal:  Annu Rev Neurosci       Date:  2013-07-08       Impact factor: 12.449

Review 4.  Information theoretic approaches to understanding circuit function.

Authors:  Adrienne Fairhall; Eric Shea-Brown; Andrea Barreiro
Journal:  Curr Opin Neurobiol       Date:  2012-07-12       Impact factor: 6.627

5.  Anthropic Correction of Information Estimates and Its Application to Neural Coding.

Authors:  Michael C Gastpar; Patrick R Gill; Alexander G Huth; Frédéric E Theunissen
Journal:  IEEE Trans Inf Theory       Date:  2010-02-25       Impact factor: 2.501

Review 6.  Analysis of Neuronal Spike Trains, Deconstructed.

Authors:  Johnatan Aljadeff; Benjamin J Lansdell; Adrienne L Fairhall; David Kleinfeld
Journal:  Neuron       Date:  2016-07-20       Impact factor: 17.173

7.  Decomposing information into copying versus transformation.

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Journal:  J R Soc Interface       Date:  2020-01-22       Impact factor: 4.118

Review 8.  Toward functional classification of neuronal types.

Authors:  Tatyana O Sharpee
Journal:  Neuron       Date:  2014-09-17       Impact factor: 17.173

9.  Dynamical principles of emotion-cognition interaction: mathematical images of mental disorders.

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10.  Ecological expected utility and the mythical neural code.

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Journal:  Cogn Neurodyn       Date:  2009-09-04       Impact factor: 5.082

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