Literature DB >> 14684857

Synergy, redundancy, and independence in population codes.

Elad Schneidman1, William Bialek, Michael J Berry.   

Abstract

A key issue in understanding the neural code for an ensemble of neurons is the nature and strength of correlations between neurons and how these correlations are related to the stimulus. The issue is complicated by the fact that there is not a single notion of independence or lack of correlation. We distinguish three kinds: (1) activity independence; (2) conditional independence; and (3) information independence. Each notion is related to an information measure: the information between cells, the information between cells given the stimulus, and the synergy of cells about the stimulus, respectively. We show that these measures form an interrelated framework for evaluating contributions of signal and noise correlations to the joint information conveyed about the stimulus and that at least two of the three measures must be calculated to characterize a population code. This framework is compared with others recently proposed in the literature. In addition, we distinguish questions about how information is encoded by a population of neurons from how that information can be decoded. Although information theory is natural and powerful for questions of encoding, it is not sufficient for characterizing the process of decoding. Decoding fundamentally requires an error measure that quantifies the importance of the deviations of estimated stimuli from actual stimuli. Because there is no a priori choice of error measure, questions about decoding cannot be put on the same level of generality as for encoding.

Mesh:

Year:  2003        PMID: 14684857      PMCID: PMC6740962     

Source DB:  PubMed          Journal:  J Neurosci        ISSN: 0270-6474            Impact factor:   6.167


  61 in total

1.  Correlations without synchrony

Authors: 
Journal:  Neural Comput       Date:  1999-10-01       Impact factor: 2.026

2.  Interspike intervals, receptive fields, and information encoding in primary visual cortex.

Authors:  D S Reich; F Mechler; K P Purpura; J D Victor
Journal:  J Neurosci       Date:  2000-03-01       Impact factor: 6.167

3.  Correlations and the encoding of information in the nervous system.

Authors:  S Panzeri; S R Schultz; A Treves; E T Rolls
Journal:  Proc Biol Sci       Date:  1999-05-22       Impact factor: 5.349

4.  Neural coding: higher-order temporal patterns in the neurostatistics of cell assemblies.

Authors:  L Martignon; G Deco; K Laskey; M Diamond; W Freiwald; E Vaadia
Journal:  Neural Comput       Date:  2000-11       Impact factor: 2.026

5.  Coding of visual information by precisely correlated spikes in the lateral geniculate nucleus.

Authors:  Y Dan; J M Alonso; W M Usrey; R C Reid
Journal:  Nat Neurosci       Date:  1998-10       Impact factor: 24.884

6.  Synergy in a neural code.

Authors:  N Brenner; S P Strong; R Koberle; W Bialek; R R de Ruyter van Steveninck
Journal:  Neural Comput       Date:  2000-07       Impact factor: 2.026

7.  Temporal coding of visual information in the thalamus.

Authors:  P Reinagel; R C Reid
Journal:  J Neurosci       Date:  2000-07-15       Impact factor: 6.167

8.  Retinal ganglion cells act largely as independent encoders.

Authors:  S Nirenberg; S M Carcieri; A L Jacobs; P E Latham
Journal:  Nature       Date:  2001-06-07       Impact factor: 49.962

9.  A unified approach to the study of temporal, correlational, and rate coding.

Authors:  S Panzeri; S R Schultz
Journal:  Neural Comput       Date:  2001-06       Impact factor: 2.026

10.  Mutual information of population codes and distance measures in probability space.

Authors:  K Kang; H Sompolinsky
Journal:  Phys Rev Lett       Date:  2001-05-21       Impact factor: 9.161

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  128 in total

1.  Decorrelation and efficient coding by retinal ganglion cells.

Authors:  Xaq Pitkow; Markus Meister
Journal:  Nat Neurosci       Date:  2012-03-11       Impact factor: 24.884

2.  Redundant information encoding in primary motor cortex during natural and prosthetic motor control.

Authors:  Kelvin So; Karunesh Ganguly; Jessica Jimenez; Michael C Gastpar; Jose M Carmena
Journal:  J Comput Neurosci       Date:  2011-11-01       Impact factor: 1.621

3.  A novel coding mechanism for social vocalizations in the lateral amygdala.

Authors:  Marie A Gadziola; Jasmine M S Grimsley; Sharad J Shanbhag; Jeffrey J Wenstrup
Journal:  J Neurophysiol       Date:  2011-11-16       Impact factor: 2.714

4.  A Distributed Neural Code in the Dentate Gyrus and in CA1.

Authors:  Fabio Stefanini; Lyudmila Kushnir; Jessica C Jimenez; Joshua H Jennings; Nicholas I Woods; Garret D Stuber; Mazen A Kheirbek; René Hen; Stefano Fusi
Journal:  Neuron       Date:  2020-06-09       Impact factor: 17.173

Review 5.  Degenerate coding in neural systems.

Authors:  Anthony Leonardo
Journal:  J Comp Physiol A Neuroethol Sens Neural Behav Physiol       Date:  2005-10-27       Impact factor: 1.836

6.  Joint decoding of visual stimuli by IT neurons' spike counts is not improved by simultaneous recording.

Authors:  Britt Anderson; Mark I Sanderson; David L Sheinberg
Journal:  Exp Brain Res       Date:  2006-07-28       Impact factor: 1.972

7.  Spatio-temporal information analysis of event-related BOLD responses.

Authors:  Galit Fuhrmann Alpert; Fellice T Sun; Daniel Handwerker; Mark D'Esposito; Robert T Knight
Journal:  Neuroimage       Date:  2006-12-22       Impact factor: 6.556

8.  Population coding by electrosensory neurons.

Authors:  Maurice J Chacron; Joseph Bastian
Journal:  J Neurophysiol       Date:  2008-02-06       Impact factor: 2.714

9.  The minimum information principle and its application to neural code analysis.

Authors:  Amir Globerson; Eran Stark; Eilon Vaadia; Naftali Tishby
Journal:  Proc Natl Acad Sci U S A       Date:  2009-02-13       Impact factor: 11.205

10.  Ideal observer analysis of signal quality in retinal circuits.

Authors:  Robert G Smith; Narender K Dhingra
Journal:  Prog Retin Eye Res       Date:  2009-05-13       Impact factor: 21.198

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