Literature DB >> 12775756

Decoding neuronal spike trains: how important are correlations?

Sheila Nirenberg1, Peter E Latham.   

Abstract

It has been known for >30 years that neuronal spike trains exhibit correlations, that is, the occurrence of a spike at one time is not independent of the occurrence of spikes at other times, both within spike trains from single neurons and across spike trains from multiple neurons. The presence of these correlations has led to the proposal that they might form a key element of the neural code. Specifically, they might act as an extra channel for information, carrying messages about events in the outside world that are not carried by other aspects of the spike trains, such as firing rate. Currently, there is no general consensus about whether this proposal applies to real spike trains in the nervous system. This is largely because it has been hard to separate information carried in correlations from that not carried in correlations. Here we propose a framework for performing this separation. Specifically, we derive an information-theoretic cost function that measures how much harder it is to decode neuronal responses when correlations are ignored than when they are taken into account. This cost function can be readily applied to real neuronal data.

Mesh:

Year:  2003        PMID: 12775756      PMCID: PMC165878          DOI: 10.1073/pnas.1131895100

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  39 in total

1.  Linear to supralinear summation of AMPA-mediated EPSPs in neocortical pyramidal neurons.

Authors:  J S Nettleton; W J Spain
Journal:  J Neurophysiol       Date:  2000-06       Impact factor: 2.714

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Journal:  Proc Biol Sci       Date:  1999-05-22       Impact factor: 5.349

3.  Synaptic interactions between thalamic inputs to simple cells in cat visual cortex.

Authors:  W M Usrey; J M Alonso; R C Reid
Journal:  J Neurosci       Date:  2000-07-15       Impact factor: 6.167

4.  A unified approach to the study of temporal, correlational, and rate coding.

Authors:  S Panzeri; S R Schultz
Journal:  Neural Comput       Date:  2001-06       Impact factor: 2.026

5.  Paired-spike interactions and synaptic efficacy of retinal inputs to the thalamus.

Authors:  W M Usrey; J B Reppas; R C Reid
Journal:  Nature       Date:  1998-09-24       Impact factor: 49.962

6.  A model for visual shape recognition.

Authors:  P M Milner
Journal:  Psychol Rev       Date:  1974-11       Impact factor: 8.934

7.  Temporal encoding of two-dimensional patterns by single units in primate inferior temporal cortex. III. Information theoretic analysis.

Authors:  L M Optican; B J Richmond
Journal:  J Neurophysiol       Date:  1987-01       Impact factor: 2.714

8.  Dynamics of neuronal interactions in monkey cortex in relation to behavioural events.

Authors:  E Vaadia; I Haalman; M Abeles; H Bergman; Y Prut; H Slovin; A Aertsen
Journal:  Nature       Date:  1995-02-09       Impact factor: 49.962

9.  Correlated firing of cat retinal ganglion cells. II. Responses of X- and Y-cells to single quantal events.

Authors:  D N Mastronarde
Journal:  J Neurophysiol       Date:  1983-02       Impact factor: 2.714

10.  Population coding of stimulus location in rat somatosensory cortex.

Authors:  R S Petersen; S Panzeri; M E Diamond
Journal:  Neuron       Date:  2001-11-08       Impact factor: 17.173

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  71 in total

1.  Synergy, redundancy, and independence in population codes.

Authors:  Elad Schneidman; William Bialek; Michael J Berry
Journal:  J Neurosci       Date:  2003-12-17       Impact factor: 6.167

2.  Low error discrimination using a correlated population code.

Authors:  Greg Schwartz; Jakob Macke; Dario Amodei; Hanlin Tang; Michael J Berry
Journal:  J Neurophysiol       Date:  2012-04-25       Impact factor: 2.714

Review 3.  Neurophysiological and computational principles of cortical rhythms in cognition.

Authors:  Xiao-Jing Wang
Journal:  Physiol Rev       Date:  2010-07       Impact factor: 37.312

4.  Correlations between neuron activity in the sensorimotor cortex of the right and left hemispheres in rabbits during a defensive dominant and "animal hypnosis".

Authors:  A V Bogdanov; A G Galashina; N N Karamysheva
Journal:  Neurosci Behav Physiol       Date:  2010-07-17

5.  A discrete time neural network model with spiking neurons: II: dynamics with noise.

Authors:  B Cessac
Journal:  J Math Biol       Date:  2010-07-24       Impact factor: 2.259

6.  Stimulus discrimination via responses of retinal ganglion cells and dopamine-dependent modulation.

Authors:  Hao Li; Pei-Ji Liang
Journal:  Neurosci Bull       Date:  2013-08-29       Impact factor: 5.203

7.  Joint decoding of visual stimuli by IT neurons' spike counts is not improved by simultaneous recording.

Authors:  Britt Anderson; Mark I Sanderson; David L Sheinberg
Journal:  Exp Brain Res       Date:  2006-07-28       Impact factor: 1.972

8.  Spike coding from the perspective of a neurone.

Authors:  G S Bhumbra; R E J Dyball
Journal:  Cogn Process       Date:  2005-08-12

9.  Population coding by electrosensory neurons.

Authors:  Maurice J Chacron; Joseph Bastian
Journal:  J Neurophysiol       Date:  2008-02-06       Impact factor: 2.714

10.  The minimum information principle and its application to neural code analysis.

Authors:  Amir Globerson; Eran Stark; Eilon Vaadia; Naftali Tishby
Journal:  Proc Natl Acad Sci U S A       Date:  2009-02-13       Impact factor: 11.205

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