Literature DB >> 19158076

Structural and functional studies of archaeal viruses.

C Martin Lawrence1, Smita Menon, Brian J Eilers, Brian Bothner, Reza Khayat, Trevor Douglas, Mark J Young.   

Abstract

Viruses populate virtually every ecosystem on the planet, including the extreme acidic, thermal, and saline environments where archaeal organisms can dominate. For example, recent studies have identified crenarchaeal viruses in the hot springs of Yellowstone National Park and other high temperature environments worldwide. These viruses are often morphologically and genetically unique, with genomes that show little similarity to genes of known function, complicating efforts to understand their viral life cycles. Here, we review progress in understanding these fascinating viruses at the molecular level and the evolutionary insights coming from these studies.

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Year:  2009        PMID: 19158076      PMCID: PMC2675988          DOI: 10.1074/jbc.R800078200

Source DB:  PubMed          Journal:  J Biol Chem        ISSN: 0021-9258            Impact factor:   5.157


  45 in total

1.  Viral eukaryogenesis: was the ancestor of the nucleus a complex DNA virus?

Authors:  P J Bell
Journal:  J Mol Evol       Date:  2001-09       Impact factor: 2.395

2.  Analysis of transcription in the archaebacterium Sulfolobus indicates that archaebacterial promoters are homologous to eukaryotic pol II promoters.

Authors:  W D Reiter; P Palm; W Zillig
Journal:  Nucleic Acids Res       Date:  1988-01-11       Impact factor: 16.971

3.  Transcription of the rod-shaped viruses SIRV1 and SIRV2 of the hyperthermophilic archaeon sulfolobus.

Authors:  Alexandra Kessler; Arie B Brinkman; John van der Oost; David Prangishvili
Journal:  J Bacteriol       Date:  2004-11       Impact factor: 3.490

4.  The SSV1 viral integrase is not essential.

Authors:  Adam J Clore; Kenneth M Stedman
Journal:  Virology       Date:  2006-12-18       Impact factor: 3.616

5.  TTSV1, a new virus-like particle isolated from the hyperthermophilic crenarchaeote Thermoproteus tenax.

Authors:  Dae-Gyun Ahn; Se-Il Kim; Jin-Kyu Rhee; Kwang Pyo Kim; Jae-Gu Pan; Jong-Won Oh
Journal:  Virology       Date:  2006-05-06       Impact factor: 3.616

Review 6.  CRISPR--a widespread system that provides acquired resistance against phages in bacteria and archaea.

Authors:  Rotem Sorek; Victor Kunin; Philip Hugenholtz
Journal:  Nat Rev Microbiol       Date:  2008-03       Impact factor: 60.633

Review 7.  Marine viruses--major players in the global ecosystem.

Authors:  Curtis A Suttle
Journal:  Nat Rev Microbiol       Date:  2007-10       Impact factor: 60.633

8.  Sulfolobus tengchongensis spindle-shaped virus STSV1: virus-host interactions and genomic features.

Authors:  Xiaoyu Xiang; Lanming Chen; Xiaoxing Huang; Yuanmin Luo; Qunxin She; Li Huang
Journal:  J Virol       Date:  2005-07       Impact factor: 5.103

9.  Structure of A197 from Sulfolobus turreted icosahedral virus: a crenarchaeal viral glycosyltransferase exhibiting the GT-A fold.

Authors:  Eric T Larson; Dirk Reiter; Mark Young; C Martin Lawrence
Journal:  J Virol       Date:  2006-08       Impact factor: 5.103

10.  The structure of a thermophilic archaeal virus shows a double-stranded DNA viral capsid type that spans all domains of life.

Authors:  George Rice; Liang Tang; Kenneth Stedman; Francisco Roberto; Josh Spuhler; Eric Gillitzer; John E Johnson; Trevor Douglas; Mark Young
Journal:  Proc Natl Acad Sci U S A       Date:  2004-05-03       Impact factor: 11.205

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  42 in total

1.  Structural studies of E73 from a hyperthermophilic archaeal virus identify the "RH3" domain, an elaborated ribbon-helix-helix motif involved in DNA recognition.

Authors:  Casey Schlenker; Anupam Goel; Brian P Tripet; Smita Menon; Taylor Willi; Mensur Dlakić; Mark J Young; C Martin Lawrence; Valérie Copié
Journal:  Biochemistry       Date:  2012-03-22       Impact factor: 3.162

2.  Identification of novel positive-strand RNA viruses by metagenomic analysis of archaea-dominated Yellowstone hot springs.

Authors:  Benjamin Bolduc; Daniel P Shaughnessy; Yuri I Wolf; Eugene V Koonin; Francisco F Roberto; Mark Young
Journal:  J Virol       Date:  2012-02-29       Impact factor: 5.103

3.  The structure of an archaeal viral integrase reveals an evolutionarily conserved catalytic core yet supports a mechanism of DNA cleavage in trans.

Authors:  Brian J Eilers; Mark J Young; C Martin Lawrence
Journal:  J Virol       Date:  2012-05-16       Impact factor: 5.103

4.  Functional interplay between a virus and the ESCRT machinery in archaea.

Authors:  Jamie C Snyder; Rachel Y Samson; Susan K Brumfield; Stephen D Bell; Mark J Young
Journal:  Proc Natl Acad Sci U S A       Date:  2013-06-10       Impact factor: 11.205

Review 5.  Host and viral transcriptional regulators in Sulfolobus: an overview.

Authors:  Patrizia Contursi; Salvatore Fusco; Danila Limauro; Gabriella Fiorentino
Journal:  Extremophiles       Date:  2013-10-02       Impact factor: 2.395

6.  Structure, function, and targets of the transcriptional regulator SvtR from the hyperthermophilic archaeal virus SIRV1.

Authors:  Florence Guillière; Nuno Peixeiro; Alexandra Kessler; Bertrand Raynal; Nicole Desnoues; Jenny Keller; Muriel Delepierre; David Prangishvili; Guennadi Sezonov; J Iñaki Guijarro
Journal:  J Biol Chem       Date:  2009-06-17       Impact factor: 5.157

7.  Phages in nature.

Authors:  Martha Rj Clokie; Andrew D Millard; Andrey V Letarov; Shaun Heaphy
Journal:  Bacteriophage       Date:  2011-01

Review 8.  Molecular biology of fuselloviruses and their satellites.

Authors:  Patrizia Contursi; Salvatore Fusco; Raffaele Cannio; Qunxin She
Journal:  Extremophiles       Date:  2014-02-23       Impact factor: 2.395

9.  Insights into a viral lytic pathway from an archaeal virus-host system.

Authors:  Jamie C Snyder; Susan K Brumfield; Keshia M Kerchner; Tessa E F Quax; David Prangishvili; Mark J Young
Journal:  J Virol       Date:  2012-12-05       Impact factor: 5.103

10.  Atomic structure of the 75 MDa extremophile Sulfolobus turreted icosahedral virus determined by CryoEM and X-ray crystallography.

Authors:  David Veesler; Thiam-Seng Ng; Anoop K Sendamarai; Brian J Eilers; C Martin Lawrence; Shee-Mei Lok; Mark J Young; John E Johnson; Chi-yu Fu
Journal:  Proc Natl Acad Sci U S A       Date:  2013-03-21       Impact factor: 11.205

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