Literature DB >> 2829113

Analysis of transcription in the archaebacterium Sulfolobus indicates that archaebacterial promoters are homologous to eukaryotic pol II promoters.

W D Reiter1, P Palm, W Zillig.   

Abstract

The 5'-termini were precisely mapped for five constitutive and one UV-inducible transcript from the Sulfolobus virus-like particle SSV1. The comparison of the DNA sequences around these transcriptional initiation sites revealed the presence of two conserved sequence elements: a trinucleotide sequence close to the initiation site itself and an AT-rich hexanucleotide sequence centered about 26 nucleotides upstream of it. Similar DNA sequences were found upstream of the transcriptional start sites for the ribosomal RNA genes in Sulfolobus and upstream of transcriptional start sites in other archaebacteria, allowing the derivation of a general consensus sequence for archaebacterial promoters. This consensus sequence is unlike that found in eubacteria but it resembles promoters recognized by eukaryotic RNA polymerase II.

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Year:  1988        PMID： 2829113      PMCID： PMC334609          DOI： 10.1093/nar/16.1.1

Source DB:  PubMed          Journal:  Nucleic Acids Res        ISSN： 0305-1048            Impact factor:   16.971


  32 in total

1.  Multiple promoters for the transcription of the ribosomal RNA gene cluster in Halobacterium cutirubrum.

Authors:  P P Dennis
Journal:  J Mol Biol       Date:  1985-11-20       Impact factor: 5.469

Review 2.  Multiple procaryotic ribonucleic acid polymerase sigma factors.

Authors:  R H Doi; L F Wang
Journal:  Microbiol Rev       Date:  1986-09

3.  Compilation and analysis of eukaryotic POL II promoter sequences.

Authors:  P Bucher; E N Trifonov
Journal:  Nucleic Acids Res       Date:  1986-12-22       Impact factor: 16.971

Review 4.  Archaebacteria and the origin of the eukaryotic cytoplasm.

Authors:  W Zillig; R Schnabel; K O Stetter
Journal:  Curr Top Microbiol Immunol       Date:  1985       Impact factor: 4.291

5.  Gene expression in archaebacteria: physical mapping of constitutive and UV-inducible transcripts from the Sulfolobus virus-like particle SSV1.

Authors:  W D Reiter; P Palm; S Yeats; W Zillig
Journal:  Mol Gen Genet       Date:  1987-09

Review 6.  Transcription by RNA polymerase III.

Authors:  G Ciliberto; L Castagnoli; R Cortese
Journal:  Curr Top Dev Biol       Date:  1983       Impact factor: 4.897

7.  Archaebacteria.

Authors:  C R Woese; L J Magrum; G E Fox
Journal:  J Mol Evol       Date:  1978-08-02       Impact factor: 2.395

8.  Putative promoter elements for the ribosomal RNA genes of the thermoacidophilic archaebacterium Sulfolobus sp. strain B12.

Authors:  W D Reiter; P Palm; W Voos; J Kaniecki; B Grampp; W Schulz; W Zillig
Journal:  Nucleic Acids Res       Date:  1987-07-24       Impact factor: 16.971

9.  The primary structure of a procaryotic glycoprotein. Cloning and sequencing of the cell surface glycoprotein gene of halobacteria.

Authors:  J Lechner; M Sumper
Journal:  J Biol Chem       Date:  1987-07-15       Impact factor: 5.157

10.  Archaebacteria and eukaryotes possess DNA-dependent RNA polymerases of a common type.

Authors:  J Huet; R Schnabel; A Sentenac; W Zillig
Journal:  EMBO J       Date:  1983       Impact factor: 11.598
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  77 in total

1.  The structural basis for the oriented assembly of a TBP/TFB/promoter complex.

Authors:  O Littlefield; Y Korkhin; P B Sigler
Journal:  Proc Natl Acad Sci U S A       Date:  1999-11-23       Impact factor: 11.205

2.  Molecular characterization of the sor gene, which encodes the sulfur oxygenase/reductase of the thermoacidophilic Archaeum Desulfurolobus ambivalens.

Authors:  A Kletzin
Journal:  J Bacteriol       Date:  1992-09       Impact factor: 3.490

3.  Nucleotide sequence of the gene coding for ribosomal protein S10 from the archaeum Thermoplasma acidophilum.

Authors:  A Tesch; F Klink
Journal:  Nucleic Acids Res       Date:  1992-08-11       Impact factor: 16.971

4.  In vitro transcription of two rRNA genes of the archaebacterium Sulfolobus sp. B12 indicates a factor requirement for specific initiation.

Authors:  U Hüdepohl; W D Reiter; W Zillig
Journal:  Proc Natl Acad Sci U S A       Date:  1990-08       Impact factor: 11.205

5.  Transcription of the rod-shaped viruses SIRV1 and SIRV2 of the hyperthermophilic archaeon sulfolobus.

Authors:  Alexandra Kessler; Arie B Brinkman; John van der Oost; David Prangishvili
Journal:  J Bacteriol       Date:  2004-11       Impact factor: 3.490

6.  A DNA polymerase from the archaeon Sulfolobus solfataricus shows sequence similarity to family B DNA polymerases.

Authors:  F M Pisani; C De Martino; M Rossi
Journal:  Nucleic Acids Res       Date:  1992-06-11       Impact factor: 16.971

7.  Identification and characterization of a defective SSV1 genome integrated into a tRNA gene in the archaebacterium Sulfolobus sp. B12.

Authors:  W D Reiter; P Palm
Journal:  Mol Gen Genet       Date:  1990-03

8.  Exchange of genetic markers at extremely high temperatures in the archaeon Sulfolobus acidocaldarius.

Authors:  D W Grogan
Journal:  J Bacteriol       Date:  1996-06       Impact factor: 3.490

9.  Purification and sequence analysis of a novel NADP(H)-dependent type III alcohol dehydrogenase from Thermococcus strain AN1.

Authors:  D Li; K J Stevenson
Journal:  J Bacteriol       Date:  1997-07       Impact factor: 3.490

10.  Phenotypic characterization of the archaebacterial genus Sulfolobus: comparison of five wild-type strains.

Authors:  D W Grogan
Journal:  J Bacteriol       Date:  1989-12       Impact factor: 3.490
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