Literature DB >> 18757916

Requirement of Rad5 for DNA polymerase zeta-dependent translesion synthesis in Saccharomyces cerevisiae.

Vincent Pagès1, Anne Bresson, Narottam Acharya, Satya Prakash, Robert P Fuchs, Louise Prakash.   

Abstract

In yeast, Rad6-Rad18-dependent lesion bypass involves translesion synthesis (TLS) by DNA polymerases eta or zeta or Rad5-dependent postreplication repair (PRR) in which error-free replication through the DNA lesion occurs by template switching. Rad5 functions in PRR via its two distinct activities--a ubiquitin ligase that promotes Mms2-Ubc13-mediated K63-linked polyubiquitination of PCNA at its lysine 164 residue and a DNA helicase that is specialized for replication fork regression. Both these activities are important for Rad5's ability to function in PRR. Here we provide evidence for the requirement of Rad5 in TLS mediated by Polzeta. Using duplex plasmids carrying different site-specific DNA lesions--an abasic site, a cis-syn TT dimer, a (6-4) TT photoproduct, or a G-AAF adduct--we show that Rad5 is needed for Polzeta-dependent TLS. Rad5 action in this role is likely to be structural, since neither the inactivation of its ubiquitin ligase activity nor the inactivation of its helicase activity impairs its role in TLS.

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Year:  2008        PMID: 18757916      PMCID: PMC2535723          DOI: 10.1534/genetics.108.091066

Source DB:  PubMed          Journal:  Genetics        ISSN: 0016-6731            Impact factor:   4.562


  49 in total

1.  Roles of yeast DNA polymerases delta and zeta and of Rev1 in the bypass of abasic sites.

Authors:  L Haracska; I Unk; R E Johnson; E Johansson; P M Burgers; S Prakash; L Prakash
Journal:  Genes Dev       Date:  2001-04-15       Impact factor: 11.361

2.  Yeast and human translesion DNA synthesis polymerases: expression, purification, and biochemical characterization.

Authors:  Robert E Johnson; Louise Prakash; Satya Prakash
Journal:  Methods Enzymol       Date:  2006       Impact factor: 1.600

3.  Protein-template-directed synthesis across an acrolein-derived DNA adduct by yeast Rev1 DNA polymerase.

Authors:  Deepak T Nair; Robert E Johnson; Louise Prakash; Satya Prakash; Aneel K Aggarwal
Journal:  Structure       Date:  2008-02       Impact factor: 5.006

4.  Regulation of polymerase exchange between Poleta and Poldelta by monoubiquitination of PCNA and the movement of DNA polymerase holoenzyme.

Authors:  Zhihao Zhuang; Robert E Johnson; Lajos Haracska; Louise Prakash; Satya Prakash; Stephen J Benkovic
Journal:  Proc Natl Acad Sci U S A       Date:  2008-04-02       Impact factor: 11.205

5.  Complex formation with Rev1 enhances the proficiency of Saccharomyces cerevisiae DNA polymerase zeta for mismatch extension and for extension opposite from DNA lesions.

Authors:  Narottam Acharya; Robert E Johnson; Satya Prakash; Louise Prakash
Journal:  Mol Cell Biol       Date:  2006-10-09       Impact factor: 4.272

6.  The Saccharomyces cerevisiae RAD30 gene, a homologue of Escherichia coli dinB and umuC, is DNA damage inducible and functions in a novel error-free postreplication repair mechanism.

Authors:  J P McDonald; A S Levine; R Woodgate
Journal:  Genetics       Date:  1997-12       Impact factor: 4.562

7.  Yeast DNA repair proteins Rad6 and Rad18 form a heterodimer that has ubiquitin conjugating, DNA binding, and ATP hydrolytic activities.

Authors:  V Bailly; S Lauder; S Prakash; L Prakash
Journal:  J Biol Chem       Date:  1997-09-12       Impact factor: 5.157

8.  The relative roles in vivo of Saccharomyces cerevisiae Pol eta, Pol zeta, Rev1 protein and Pol32 in the bypass and mutation induction of an abasic site, T-T (6-4) photoadduct and T-T cis-syn cyclobutane dimer.

Authors:  Peter E M Gibbs; John McDonald; Roger Woodgate; Christopher W Lawrence
Journal:  Genetics       Date:  2004-11-01       Impact factor: 4.562

9.  Complex formation of yeast Rev1 and Rev7 proteins: a novel role for the polymerase-associated domain.

Authors:  Narottam Acharya; Lajos Haracska; Robert E Johnson; Ildiko Unk; Satya Prakash; Louise Prakash
Journal:  Mol Cell Biol       Date:  2005-11       Impact factor: 4.272

10.  Genetic interactions between mutants of the 'error-prone' repair group of Saccharomyces cerevisiae and their effect on recombination and mutagenesis.

Authors:  B Liefshitz; R Steinlauf; A Friedl; F Eckardt-Schupp; M Kupiec
Journal:  Mutat Res       Date:  1998-03       Impact factor: 2.433

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  32 in total

1.  Rad8Rad5/Mms2-Ubc13 ubiquitin ligase complex controls translesion synthesis in fission yeast.

Authors:  Stéphane Coulon; Sharada Ramasubramanyan; Carole Alies; Gaëlle Philippin; Alan Lehmann; Robert P Fuchs
Journal:  EMBO J       Date:  2010-05-07       Impact factor: 11.598

2.  Pol31 and Pol32 subunits of yeast DNA polymerase δ are also essential subunits of DNA polymerase ζ.

Authors:  Robert E Johnson; Louise Prakash; Satya Prakash
Journal:  Proc Natl Acad Sci U S A       Date:  2012-06-18       Impact factor: 11.205

Review 3.  Replicating damaged DNA in eukaryotes.

Authors:  Nimrat Chatterjee; Wolfram Siede
Journal:  Cold Spring Harb Perspect Biol       Date:  2013-12-01       Impact factor: 10.005

4.  Shared genetic pathways contribute to the tolerance of endogenous and low-dose exogenous DNA damage in yeast.

Authors:  Kevin Lehner; Sue Jinks-Robertson
Journal:  Genetics       Date:  2014-07-24       Impact factor: 4.562

Review 5.  Translesion DNA synthesis and mutagenesis in eukaryotes.

Authors:  Julian E Sale
Journal:  Cold Spring Harb Perspect Biol       Date:  2013-03-01       Impact factor: 10.005

Review 6.  DNA repair mechanisms and the bypass of DNA damage in Saccharomyces cerevisiae.

Authors:  Serge Boiteux; Sue Jinks-Robertson
Journal:  Genetics       Date:  2013-04       Impact factor: 4.562

7.  Rad5 coordinates translesion DNA synthesis pathway by recognizing specific DNA structures in saccharomyces cerevisiae.

Authors:  Qifu Fan; Xin Xu; Xi Zhao; Qian Wang; Wei Xiao; Ying Guo; Yu V Fu
Journal:  Curr Genet       Date:  2018-02-02       Impact factor: 3.886

8.  A novel variant of DNA polymerase ζ, Rev3ΔC, highlights differential regulation of Pol32 as a subunit of polymerase δ versus ζ in Saccharomyces cerevisiae.

Authors:  Hollie M Siebler; Artem G Lada; Andrey G Baranovskiy; Tahir H Tahirov; Youri I Pavlov
Journal:  DNA Repair (Amst)       Date:  2014-05-10

9.  DNA damage tolerance: when it's OK to make mistakes.

Authors:  Debbie J Chang; Karlene A Cimprich
Journal:  Nat Chem Biol       Date:  2009-01-15       Impact factor: 15.040

10.  Post-replication repair suppresses duplication-mediated genome instability.

Authors:  Christopher D Putnam; Tikvah K Hayes; Richard D Kolodner
Journal:  PLoS Genet       Date:  2010-05-06       Impact factor: 5.917

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