Literature DB >> 22711820

Pol31 and Pol32 subunits of yeast DNA polymerase δ are also essential subunits of DNA polymerase ζ.

Robert E Johnson1, Louise Prakash, Satya Prakash.   

Abstract

Replication through a diverse array of DNA lesions occurs by the sequential action of two translesion synthesis (TLS) DNA polymerases (Pols), in which one inserts the nucleotide opposite the lesion and the other carries out the subsequent extension. By extending from the nucleotide inserted by another Pol, Polζ plays an indispensable role in mediating lesion bypass. Polζ comprises the Rev3 catalytic and Rev7 accessory subunits. Pol32, a subunit of the replicative polymerase Polδ, is also required for Polζ-dependent TLS, but how this Polδ subunit contributes to Polζ function in TLS has remained unknown. Here we show that yeast Polζ is a four-subunit enzyme containing Rev3, Rev7, Pol31, and Pol32; in this complex, association with Pol31/Pol32 is mediated via binding of the Rev3 C terminus to Pol31. The functional requirement of this complex is supported by evidence that mutational inactivation of Rev3's ability to bind Pol31 abrogates Polζ's role in TLS in yeast cells. These findings identify an unexpected role of Pol31 and Pol32 as two essential subunits of Polζ, and clarify why these proteins are required for Polζ-dependent TLS, but not for TLS mediated by Polη in yeast cells. To distinguish the four-subunit complex from the two-subunit Polζ, we designate the four-subunit enzyme "Polζ-d," where "-d" denotes the Pol31/Pol32 subunits of Polδ.

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Year:  2012        PMID: 22711820      PMCID: PMC3411960          DOI: 10.1073/pnas.1206052109

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  38 in total

1.  Roles of yeast DNA polymerases delta and zeta and of Rev1 in the bypass of abasic sites.

Authors:  L Haracska; I Unk; R E Johnson; E Johansson; P M Burgers; S Prakash; L Prakash
Journal:  Genes Dev       Date:  2001-04-15       Impact factor: 11.361

2.  Yeast and human translesion DNA synthesis polymerases: expression, purification, and biochemical characterization.

Authors:  Robert E Johnson; Louise Prakash; Satya Prakash
Journal:  Methods Enzymol       Date:  2006       Impact factor: 1.600

3.  Mutational specificity and genetic control of replicative bypass of an abasic site in yeast.

Authors:  Vincent Pagès; Robert E Johnson; Louise Prakash; Satya Prakash
Journal:  Proc Natl Acad Sci U S A       Date:  2008-01-17       Impact factor: 11.205

4.  Division of labor at the eukaryotic replication fork.

Authors:  Stephanie A Nick McElhinny; Dmitry A Gordenin; Carrie M Stith; Peter M J Burgers; Thomas A Kunkel
Journal:  Mol Cell       Date:  2008-04-25       Impact factor: 17.970

5.  Disruption of the Rev3l-encoded catalytic subunit of polymerase zeta in mice results in early embryonic lethality.

Authors:  G Esposito; I Godindagger; U Klein; M L Yaspo; A Cumano; K Rajewsky
Journal:  Curr Biol       Date:  2000-10-05       Impact factor: 10.834

6.  Complex formation with Rev1 enhances the proficiency of Saccharomyces cerevisiae DNA polymerase zeta for mismatch extension and for extension opposite from DNA lesions.

Authors:  Narottam Acharya; Robert E Johnson; Satya Prakash; Louise Prakash
Journal:  Mol Cell Biol       Date:  2006-10-09       Impact factor: 4.272

7.  X-ray structure of the complex of regulatory subunits of human DNA polymerase delta.

Authors:  Andrey G Baranovskiy; Nigar D Babayeva; Victoria G Liston; Igor B Rogozin; Eugene V Koonin; Youri I Pavlov; Dmitry G Vassylyev; Tahir H Tahirov
Journal:  Cell Cycle       Date:  2008-10-04       Impact factor: 4.534

8.  Control of spontaneous and damage-induced mutagenesis by SUMO and ubiquitin conjugation.

Authors:  Philipp Stelter; Helle D Ulrich
Journal:  Nature       Date:  2003-09-11       Impact factor: 49.962

9.  Characterization of the two small subunits of Saccharomyces cerevisiae DNA polymerase delta.

Authors:  K J Gerik; X Li; A Pautz; P M Burgers
Journal:  J Biol Chem       Date:  1998-07-31       Impact factor: 5.157

10.  Pol zeta ablation in B cells impairs the germinal center reaction, class switch recombination, DNA break repair, and genome stability.

Authors:  Dominik Schenten; Sven Kracker; Gloria Esposito; Sonia Franco; Ulf Klein; Michael Murphy; Frederick W Alt; Klaus Rajewsky
Journal:  J Exp Med       Date:  2009-02-09       Impact factor: 14.307

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  103 in total

1.  DNA polymerases δ and λ cooperate in repairing double-strand breaks by microhomology-mediated end-joining in Saccharomyces cerevisiae.

Authors:  Damon Meyer; Becky Xu Hua Fu; Wolf-Dietrich Heyer
Journal:  Proc Natl Acad Sci U S A       Date:  2015-11-25       Impact factor: 11.205

2.  Fate of the replisome following arrest by UV-induced DNA damage in Escherichia coli.

Authors:  H Arthur Jeiranian; Brandy J Schalow; Charmain T Courcelle; Justin Courcelle
Journal:  Proc Natl Acad Sci U S A       Date:  2013-06-25       Impact factor: 11.205

3.  The architecture of yeast DNA polymerase ζ.

Authors:  Yacob Gómez-Llorente; Radhika Malik; Rinku Jain; Jayati Roy Choudhury; Robert E Johnson; Louise Prakash; Satya Prakash; Iban Ubarretxena-Belandia; Aneel K Aggarwal
Journal:  Cell Rep       Date:  2013-10-10       Impact factor: 9.423

4.  Crystal Structure of the Human Pol α B Subunit in Complex with the C-terminal Domain of the Catalytic Subunit.

Authors:  Yoshiaki Suwa; Jianyou Gu; Andrey G Baranovskiy; Nigar D Babayeva; Youri I Pavlov; Tahir H Tahirov
Journal:  J Biol Chem       Date:  2015-04-06       Impact factor: 5.157

5.  A Small Molecule Targeting Mutagenic Translesion Synthesis Improves Chemotherapy.

Authors:  Jessica L Wojtaszek; Nimrat Chatterjee; Javaria Najeeb; Azucena Ramos; Minhee Lee; Ke Bian; Jenny Y Xue; Benjamin A Fenton; Hyeri Park; Deyu Li; Michael T Hemann; Jiyong Hong; Graham C Walker; Pei Zhou
Journal:  Cell       Date:  2019-06-06       Impact factor: 41.582

Review 6.  Translesion DNA polymerases in eukaryotes: what makes them tick?

Authors:  Alexandra Vaisman; Roger Woodgate
Journal:  Crit Rev Biochem Mol Biol       Date:  2017-03-09       Impact factor: 8.250

7.  Rev7 dimerization is important for assembly and function of the Rev1/Polζ translesion synthesis complex.

Authors:  Alessandro A Rizzo; Faye-Marie Vassel; Nimrat Chatterjee; Sanjay D'Souza; Yunfeng Li; Bing Hao; Michael T Hemann; Graham C Walker; Dmitry M Korzhnev
Journal:  Proc Natl Acad Sci U S A       Date:  2018-08-15       Impact factor: 11.205

8.  A novel variant of DNA polymerase ζ, Rev3ΔC, highlights differential regulation of Pol32 as a subunit of polymerase δ versus ζ in Saccharomyces cerevisiae.

Authors:  Hollie M Siebler; Artem G Lada; Andrey G Baranovskiy; Tahir H Tahirov; Youri I Pavlov
Journal:  DNA Repair (Amst)       Date:  2014-05-10

Review 9.  DNA polymerase delta in DNA replication and genome maintenance.

Authors:  Marc J Prindle; Lawrence A Loeb
Journal:  Environ Mol Mutagen       Date:  2012-10-13       Impact factor: 3.216

10.  PCNA is efficiently loaded on the DNA recombination intermediate to modulate polymerase δ, η, and ζ activities.

Authors:  Jian Li; Donald L Holzschu; Tomohiko Sugiyama
Journal:  Proc Natl Acad Sci U S A       Date:  2013-04-22       Impact factor: 11.205

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