Literature DB >> 29396601

Rad5 coordinates translesion DNA synthesis pathway by recognizing specific DNA structures in saccharomyces cerevisiae.

Qifu Fan1,2, Xin Xu1, Xi Zhao1,2, Qian Wang3, Wei Xiao3, Ying Guo1, Yu V Fu4,5.   

Abstract

DNA repair is essential to maintain genome integrity. In addition to various DNA repair pathways dealing with specific types of DNA lesions, DNA damage tolerance (DDT) promotes the bypass of DNA replication blocks encountered by the replication fork to prevent cell death. Budding yeast Rad5 plays an essential role in the DDT pathway and its structure indicates that Rad5 recognizes damaged DNA or stalled replication forks, suggesting that Rad5 plays an important role in the DDT pathway choice. It has been reported that Rad5 forms subnuclear foci in the presence of methyl methanesulfonate (MMS) during the S phase. By analyzing the formation of Rad5 foci after MMS treatment, we showed that some specific DNA structures rather than mono-ubiquitination of proliferating cell nuclear antigen are required for the recruitment of Rad5 to the damaged site. Moreover, inactivation of the base excision repair (BER) pathway greatly decreased the Rad5 focus formation, suggesting that Rad5 recognizes specific DNA structures generated by BER. We also identified a negative role of overexpressed translesion synthesis polymerase Polη in the formation of Rad5 foci. Based on these data, we propose a modified DDT pathway model in which Rad5 plays a role in activating the DDT pathway.

Entities:  

Keywords:  Base excision repair; DNA damage tolerance; Polη; Rad5

Mesh:

Substances:

Year:  2018        PMID: 29396601     DOI: 10.1007/s00294-018-0807-y

Source DB:  PubMed          Journal:  Curr Genet        ISSN: 0172-8083            Impact factor:   3.886


  69 in total

1.  The Proliferating Cell Nuclear Antigen (PCNA)-interacting Protein (PIP) Motif of DNA Polymerase η Mediates Its Interaction with the C-terminal Domain of Rev1.

Authors:  Elizabeth M Boehm; Kyle T Powers; Christine M Kondratick; Maria Spies; Jon C D Houtman; M Todd Washington
Journal:  J Biol Chem       Date:  2016-02-22       Impact factor: 5.157

2.  Structure of a Novel DNA-binding Domain of Helicase-like Transcription Factor (HLTF) and Its Functional Implication in DNA Damage Tolerance.

Authors:  Asami Hishiki; Kodai Hara; Yuzu Ikegaya; Hideshi Yokoyama; Toshiyuki Shimizu; Mamoru Sato; Hiroshi Hashimoto
Journal:  J Biol Chem       Date:  2015-04-09       Impact factor: 5.157

3.  The Saccharomyces cerevisiae RAD30 gene, a homologue of Escherichia coli dinB and umuC, is DNA damage inducible and functions in a novel error-free postreplication repair mechanism.

Authors:  J P McDonald; A S Levine; R Woodgate
Journal:  Genetics       Date:  1997-12       Impact factor: 4.562

4.  REV1 accumulates in DNA damage-induced nuclear foci in human cells and is implicated in mutagenesis by benzo[a]pyrenediolepoxide.

Authors:  Suparna Mukhopadhyay; Denise R Clark; Nicholas B Watson; Wolfgang Zacharias; W Glenn McGregor
Journal:  Nucleic Acids Res       Date:  2004-11-02       Impact factor: 16.971

5.  A novel genetic system to detect protein-protein interactions.

Authors:  S Fields; O Song
Journal:  Nature       Date:  1989-07-20       Impact factor: 49.962

6.  Preventing oxidation of cellular XRCC1 affects PARP-mediated DNA damage responses.

Authors:  Julie K Horton; Donna F Stefanick; Natalie R Gassman; Jason G Williams; Scott A Gabel; Matthew J Cuneo; Rajendra Prasad; Padmini S Kedar; Eugene F Derose; Esther W Hou; Robert E London; Samuel H Wilson
Journal:  DNA Repair (Amst)       Date:  2013-07-18

7.  Camptothecin induces protein-linked DNA breaks via mammalian DNA topoisomerase I.

Authors:  Y H Hsiang; R Hertzberg; S Hecht; L F Liu
Journal:  J Biol Chem       Date:  1985-11-25       Impact factor: 5.157

8.  Copper-dependent cleavage of DNA by bleomycin.

Authors:  G M Ehrenfeld; J B Shipley; D C Heimbrook; H Sugiyama; E C Long; J H van Boom; G A van der Marel; N J Oppenheimer; S M Hecht
Journal:  Biochemistry       Date:  1987-02-10       Impact factor: 3.162

9.  Identification of a novel, widespread, and functionally important PCNA-binding motif.

Authors:  Karin M Gilljam; Emadoldin Feyzi; Per A Aas; Mirta M L Sousa; Rebekka Müller; Cathrine B Vågbø; Tara C Catterall; Nina B Liabakk; Geir Slupphaug; Finn Drabløs; Hans E Krokan; Marit Otterlei
Journal:  J Cell Biol       Date:  2009-09-07       Impact factor: 10.539

10.  Involvement of budding yeast Rad5 in translesion DNA synthesis through physical interaction with Rev1.

Authors:  Xin Xu; Aiyang Lin; Cuiyan Zhou; Susan R Blackwell; Yiran Zhang; Zihao Wang; Qianqian Feng; Ruifang Guan; Michelle D Hanna; Zhucheng Chen; Wei Xiao
Journal:  Nucleic Acids Res       Date:  2016-03-21       Impact factor: 16.971

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  15 in total

1.  Deletion of TLS polymerases promotes homologous recombination in Arabidopsis.

Authors:  A N Sakamoto; H Kaya; M Endo
Journal:  Plant Signal Behav       Date:  2018-06-26

Review 2.  A role for the yeast PCNA unloader Elg1 in eliciting the DNA damage checkpoint.

Authors:  Soumitra Sau; Martin Kupiec
Journal:  Curr Genet       Date:  2019-07-22       Impact factor: 3.886

3.  A role for Rad5 in ribonucleoside monophosphate (rNMP) tolerance.

Authors:  Menattallah Elserafy; Iman El-Shiekh; Dalia Fleifel; Reham Atteya; Abdelrahman AlOkda; Mohamed M Abdrabbou; Mostafa Nasr; Sherif F El-Khamisy
Journal:  Life Sci Alliance       Date:  2021-08-18

Review 4.  Post-Translational Modifications of PCNA: Guiding for the Best DNA Damage Tolerance Choice.

Authors:  Gemma Bellí; Neus Colomina; Laia Castells-Roca; Neus P Lorite
Journal:  J Fungi (Basel)       Date:  2022-06-10

5.  Lsm12 Mediates Deubiquitination of DNA Polymerase η To Help Saccharomyces cerevisiae Resist Oxidative Stress.

Authors:  Rui Yao; Liujia Shi; Chengjin Wu; Weihua Qiao; Liming Liu; Jing Wu
Journal:  Appl Environ Microbiol       Date:  2018-12-13       Impact factor: 4.792

6.  Structure of Rad5 provides insights into its role in tolerance to replication stress.

Authors:  Miaomiao Shen; Nalini Dhingra; Quan Wang; Xiaoxin Gong; Xin Xu; Hengyao Niu; Xiaolan Zhao; Song Xiang
Journal:  Mol Cell Oncol       Date:  2021-03-04

Review 7.  Making Choices: DNA Replication Fork Recovery Mechanisms.

Authors:  Christine M Kondratick; M Todd Washington; Maria Spies
Journal:  Semin Cell Dev Biol       Date:  2020-10-22       Impact factor: 7.499

8.  Regulation of the abundance of Y-family polymerases in the cell cycle of budding yeast in response to DNA damage.

Authors:  Aleksandra Sobolewska; Agnieszka Halas; Michal Plachta; Justyna McIntyre; Ewa Sledziewska-Gojska
Journal:  Curr Genet       Date:  2020-02-19       Impact factor: 3.886

9.  Carbon Catabolite Repression in Yeast is Not Limited to Glucose.

Authors:  Kobi Simpson-Lavy; Martin Kupiec
Journal:  Sci Rep       Date:  2019-04-24       Impact factor: 4.379

10.  Regulation of HLTF-mediated PCNA polyubiquitination by RFC and PCNA monoubiquitination levels determines choice of damage tolerance pathway.

Authors:  Yuji Masuda; Satoshi Mitsuyuki; Rie Kanao; Asami Hishiki; Hiroshi Hashimoto; Chikahide Masutani
Journal:  Nucleic Acids Res       Date:  2018-11-30       Impact factor: 16.971

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