Literature DB >> 19148176

DNA damage tolerance: when it's OK to make mistakes.

Debbie J Chang1, Karlene A Cimprich.   

Abstract

Mutations can be beneficial under conditions in which genetic diversity is advantageous, such as somatic hypermutation and antibody generation, but they can also be lethal when they disrupt basic cellular processes or cause uncontrolled proliferation and cancer. Mutations arise from inaccurate processing of lesions generated by endogenous and exogenous DNA damaging agents, and the genome is particularly vulnerable to such damage during S phase. In this phase of the cell cycle, many lesions in the DNA template block replication. Such lesions must be bypassed in order to preserve fork stability and to ensure completion of DNA replication. Lesion bypass is carried out by a set of error-prone and error-free processes collectively referred to as DNA damage tolerance mechanisms. Here, we discuss how two types of DNA damage tolerance, translesion synthesis and template switching, are regulated at stalled replication forks by ubiquitination of PCNA, and the conditions under which they occur.

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Year:  2009        PMID: 19148176      PMCID: PMC2663399          DOI: 10.1038/nchembio.139

Source DB:  PubMed          Journal:  Nat Chem Biol        ISSN: 1552-4450            Impact factor:   15.040


  87 in total

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Authors:  A Constantinou; M Tarsounas; J K Karow; R M Brosh; V A Bohr; I D Hickson; S C West
Journal:  EMBO Rep       Date:  2000-07       Impact factor: 8.807

2.  Interaction of human DNA polymerase eta with monoubiquitinated PCNA: a possible mechanism for the polymerase switch in response to DNA damage.

Authors:  Patricia L Kannouche; Jonathan Wing; Alan R Lehmann
Journal:  Mol Cell       Date:  2004-05-21       Impact factor: 17.970

Review 3.  Ubiquitin and ubiquitin-like proteins as multifunctional signals.

Authors:  Rebecca L Welchman; Colin Gordon; R John Mayer
Journal:  Nat Rev Mol Cell Biol       Date:  2005-08       Impact factor: 94.444

4.  Error-free and error-prone lesion bypass by human DNA polymerase kappa in vitro.

Authors:  Y Zhang; F Yuan; X Wu; M Wang; O Rechkoblit; J S Taylor; N E Geacintov; Z Wang
Journal:  Nucleic Acids Res       Date:  2000-11-01       Impact factor: 16.971

5.  Yeast DNA repair proteins Rad6 and Rad18 form a heterodimer that has ubiquitin conjugating, DNA binding, and ATP hydrolytic activities.

Authors:  V Bailly; S Lauder; S Prakash; L Prakash
Journal:  J Biol Chem       Date:  1997-09-12       Impact factor: 5.157

6.  PTIP/Swift is required for efficient PCNA ubiquitination in response to DNA damage.

Authors:  Thomas Göhler; Ivan M Munoz; John Rouse; J Julian Blow
Journal:  DNA Repair (Amst)       Date:  2008-03-18

7.  The 9-1-1 checkpoint clamp physically interacts with polzeta and is partially required for spontaneous polzeta-dependent mutagenesis in Saccharomyces cerevisiae.

Authors:  Simone Sabbioneda; Brenda K Minesinger; Michele Giannattasio; Paolo Plevani; Marco Muzi-Falconi; Sue Jinks-Robertson
Journal:  J Biol Chem       Date:  2005-09-15       Impact factor: 5.157

8.  Activation of ubiquitin-dependent DNA damage bypass is mediated by replication protein a.

Authors:  Adelina A Davies; Diana Huttner; Yasukazu Daigaku; Shuhua Chen; Helle D Ulrich
Journal:  Mol Cell       Date:  2008-03-14       Impact factor: 17.970

9.  The RING finger ATPase Rad5p of Saccharomyces cerevisiae contributes to DNA double-strand break repair in a ubiquitin-independent manner.

Authors:  Shuhua Chen; Adelina A Davies; Daniel Sagan; Helle D Ulrich
Journal:  Nucleic Acids Res       Date:  2005-10-13       Impact factor: 16.971

10.  Human RECQ5beta helicase promotes strand exchange on synthetic DNA structures resembling a stalled replication fork.

Authors:  Radhakrishnan Kanagaraj; Nurten Saydam; Patrick L Garcia; Lu Zheng; Pavel Janscak
Journal:  Nucleic Acids Res       Date:  2006-09-26       Impact factor: 16.971

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  104 in total

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Authors:  Michael S Bobola; Douglas D Kolstoe; A Blank; John R Silber
Journal:  Mol Cancer Ther       Date:  2010-05       Impact factor: 6.261

Review 2.  Regulation of DNA cross-link repair by the Fanconi anemia/BRCA pathway.

Authors:  Hyungjin Kim; Alan D D'Andrea
Journal:  Genes Dev       Date:  2012-07-01       Impact factor: 11.361

3.  ZRANB3 is a structure-specific ATP-dependent endonuclease involved in replication stress response.

Authors:  Ria Weston; Hanneke Peeters; Dragana Ahel
Journal:  Genes Dev       Date:  2012-07-03       Impact factor: 11.361

Review 4.  Non-canonical actions of mismatch repair.

Authors:  Gray F Crouse
Journal:  DNA Repair (Amst)       Date:  2015-12-02

5.  The distribution of genomic variations in human iPSCs is related to replication-timing reorganization during reprogramming.

Authors:  Junjie Lu; Hu Li; Ming Hu; Takayo Sasaki; Anna Baccei; David M Gilbert; Jun S Liu; James J Collins; Paul H Lerou
Journal:  Cell Rep       Date:  2014-03-27       Impact factor: 9.423

6.  A small ubiquitin binding domain inhibits ubiquitin-dependent protein recruitment to DNA repair foci.

Authors:  Corey M Helchowski; Laura F Skow; Katelyn H Roberts; Colleen L Chute; Christine E Canman
Journal:  Cell Cycle       Date:  2013-10-03       Impact factor: 4.534

Review 7.  Evolving views of DNA replication (in)fidelity.

Authors:  T A Kunkel
Journal:  Cold Spring Harb Symp Quant Biol       Date:  2009-11-10

8.  PARP10 deficiency manifests by severe developmental delay and DNA repair defect.

Authors:  Maher Awni Shahrour; Claudia M Nicolae; Simon Edvardson; Motee Ashhab; Adri M Galvan; Daniel Constantin; Bassam Abu-Libdeh; George-Lucian Moldovan; Orly Elpeleg
Journal:  Neurogenetics       Date:  2016-09-13       Impact factor: 2.660

9.  Proliferating cell nuclear antigen (PCNA)-binding protein C1orf124 is a regulator of translesion synthesis.

Authors:  Gargi Ghosal; Justin Wai-Chung Leung; Binoj C Nair; Ka-Wing Fong; Junjie Chen
Journal:  J Biol Chem       Date:  2012-08-17       Impact factor: 5.157

Review 10.  REV1 and DNA polymerase zeta in DNA interstrand crosslink repair.

Authors:  Shilpy Sharma; Christine E Canman
Journal:  Environ Mol Mutagen       Date:  2012-10-13       Impact factor: 3.216

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