Literature DB >> 18670422

Circulating mutant DNA to assess tumor dynamics.

Frank Diehl1, Kerstin Schmidt, Michael A Choti, Katharine Romans, Steven Goodman, Meng Li, Katherine Thornton, Nishant Agrawal, Lori Sokoll, Steve A Szabo, Kenneth W Kinzler, Bert Vogelstein, Luis A Diaz.   

Abstract

The measurement of circulating nucleic acids has transformed the management of chronic viral infections such as HIV. The development of analogous markers for individuals with cancer could similarly enhance the management of their disease. DNA containing somatic mutations is highly tumor specific and thus, in theory, can provide optimum markers. However, the number of circulating mutant gene fragments is small compared to the number of normal circulating DNA fragments, making it difficult to detect and quantify them with the sensitivity required for meaningful clinical use. In this study, we applied a highly sensitive approach to quantify circulating tumor DNA (ctDNA) in 162 plasma samples from 18 subjects undergoing multimodality therapy for colorectal cancer. We found that ctDNA measurements could be used to reliably monitor tumor dynamics in subjects with cancer who were undergoing surgery or chemotherapy. We suggest that this personalized genetic approach could be generally applied to individuals with other types of cancer.

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Year:  2007        PMID: 18670422      PMCID: PMC2820391          DOI: 10.1038/nm.1789

Source DB:  PubMed          Journal:  Nat Med        ISSN: 1078-8956            Impact factor:   53.440


  16 in total

Review 1.  Mutational analysis using oligonucleotide microarrays.

Authors:  J G Hacia; F S Collins
Journal:  J Med Genet       Date:  1999-10       Impact factor: 6.318

Review 2.  Emerging molecular markers of cancer.

Authors:  David Sidransky
Journal:  Nat Rev Cancer       Date:  2002-03       Impact factor: 60.716

3.  Transforming single DNA molecules into fluorescent magnetic particles for detection and enumeration of genetic variations.

Authors:  Devin Dressman; Hai Yan; Giovanni Traverso; Kenneth W Kinzler; Bert Vogelstein
Journal:  Proc Natl Acad Sci U S A       Date:  2003-07-11       Impact factor: 11.205

Review 4.  Advanced sequencing technologies: methods and goals.

Authors:  Jay Shendure; Robi D Mitra; Chris Varma; George M Church
Journal:  Nat Rev Genet       Date:  2004-05       Impact factor: 53.242

5.  BEAMing: single-molecule PCR on microparticles in water-in-oil emulsions.

Authors:  Frank Diehl; Meng Li; Yiping He; Kenneth W Kinzler; Bert Vogelstein; Devin Dressman
Journal:  Nat Methods       Date:  2006-07       Impact factor: 28.547

6.  BEAMing up for detection and quantification of rare sequence variants.

Authors:  Meng Li; Frank Diehl; Devin Dressman; Bert Vogelstein; Kenneth W Kinzler
Journal:  Nat Methods       Date:  2006-02       Impact factor: 28.547

7.  Detection and quantification of mutations in the plasma of patients with colorectal tumors.

Authors:  Frank Diehl; Meng Li; Devin Dressman; Yiping He; Dong Shen; Steve Szabo; Luis A Diaz; Steven N Goodman; Kerstin A David; Hartmut Juhl; Kenneth W Kinzler; Bert Vogelstein
Journal:  Proc Natl Acad Sci U S A       Date:  2005-10-28       Impact factor: 11.205

Review 8.  Carcinoembryonic antigen in the staging and follow-up of patients with colorectal cancer.

Authors:  Mitchell J Goldstein; Edith Peterson Mitchell
Journal:  Cancer Invest       Date:  2005       Impact factor: 2.176

9.  Circulating tumor cells, disease progression, and survival in metastatic breast cancer.

Authors:  Massimo Cristofanilli; G Thomas Budd; Matthew J Ellis; Alison Stopeck; Jeri Matera; M Craig Miller; James M Reuben; Gerald V Doyle; W Jeffrey Allard; Leon W M M Terstappen; Daniel F Hayes
Journal:  N Engl J Med       Date:  2004-08-19       Impact factor: 91.245

Review 10.  Circulating nucleic acids in plasma or serum (CNAPS) as prognostic and predictive markers in patients with solid neoplasias.

Authors:  Georg Goebel; Marion Zitt; Matthias Zitt; Hannes M Müller
Journal:  Dis Markers       Date:  2005       Impact factor: 3.434

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  914 in total

Review 1.  Screening for colorectal cancer: established and emerging modalities.

Authors:  Nikhil Pawa; Tan Arulampalam; John D Norton
Journal:  Nat Rev Gastroenterol Hepatol       Date:  2011-11-01       Impact factor: 46.802

2.  Cancer: Pinprick diagnostics.

Authors:  Eduardo Vilar; Josep Tabernero
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Review 3.  Blood-based tumor biomarkers in lung cancer for detection and treatment.

Authors:  Hirva Mamdani; Shahid Ahmed; Samantha Armstrong; Tony Mok; Shadia I Jalal
Journal:  Transl Lung Cancer Res       Date:  2017-12

Review 4.  Latest development of liquid biopsy.

Authors:  Alvin Ho-Kwan Cheung; Chit Chow; Ka-Fai To
Journal:  J Thorac Dis       Date:  2018-06       Impact factor: 2.895

5.  A phase II study of temsirolimus and erlotinib in patients with recurrent and/or metastatic, platinum-refractory head and neck squamous cell carcinoma.

Authors:  Julie E Bauman; Hugo Arias-Pulido; Sang-Joon Lee; M Houman Fekrazad; Hiroyuki Ozawa; Elana Fertig; Jason Howard; Justin Bishop; Hao Wang; Garth T Olson; Michael J Spafford; Dennie V Jones; Christine H Chung
Journal:  Oral Oncol       Date:  2013-02-04       Impact factor: 5.337

Review 6.  Tumor heterogeneity in the clinic: is it a real problem?

Authors:  Filip Janku
Journal:  Ther Adv Med Oncol       Date:  2014-03       Impact factor: 8.168

Review 7.  Predicting Radiotherapy Responses and Treatment Outcomes Through Analysis of Circulating Tumor DNA.

Authors:  Aadel A Chaudhuri; Michael S Binkley; Evan C Osmundson; Ash A Alizadeh; Maximilian Diehn
Journal:  Semin Radiat Oncol       Date:  2015-05-15       Impact factor: 5.934

8.  Cytosine deamination is a major cause of baseline noise in next-generation sequencing.

Authors:  Guoli Chen; Stacy Mosier; Christopher D Gocke; Ming-Tseh Lin; James R Eshleman
Journal:  Mol Diagn Ther       Date:  2014-10       Impact factor: 4.074

9.  Assessment of basal-like breast cancer by circulating tumor DNA analysis.

Authors:  Wei Wei; Xianyu Zhang; Shanshan Sun; Bingshu Xia; Xiaoshuan Liang; Yan Cui; Song Gao; Da Pang
Journal:  Oncol Lett       Date:  2018-03-09       Impact factor: 2.967

10.  Detection of Circulating Tumor DNA in Plasma: A Potential Biomarker for Esophageal Adenocarcinoma.

Authors:  Matthew Egyud; Mohamedtaki Tejani; Arjun Pennathur; James Luketich; Praveen Sridhar; Emiko Yamada; Anders Ståhlberg; Stefan Filges; Paul Krzyzanowski; Jennifer Jackson; Irina Kalatskaya; Wei Jiao; Gradon Nielsen; Zhongren Zhou; Virginia Litle; Lincoln Stein; Tony Godfrey
Journal:  Ann Thorac Surg       Date:  2019-05-03       Impact factor: 4.330

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