Literature DB >> 18249198

Synthesis of biopolymers using genetic code reprogramming.

Atsushi Ohta1, Yusuke Yamagishi, Hiroaki Suga.   

Abstract

Genetic code reprogramming is a new emerging methodology that enables us to synthesize non-standard peptides containing multiple non-proteinogenic amino acids using translation machinery. This review describes the historical background of this methodology and what distinguishes it from the classical 'nonsense suppression' methodology, followed by a discussion of recent developments in combining this methodology with other compatible technologies. Specifically, we discuss in detail the combination of genetic code reprogramming with flexizymes, de novo tRNA acylation ribozymes that facilitate the charging process of a variety of non-proteinogenic amino acids onto tRNAs bearing designated anticodons, and summarize some of the recent demonstrations of the synthesis of non-standard peptides with cyclic structure or/and altered backbones employing this technology.

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Year:  2008        PMID: 18249198     DOI: 10.1016/j.cbpa.2007.12.009

Source DB:  PubMed          Journal:  Curr Opin Chem Biol        ISSN: 1367-5931            Impact factor:   8.822


  16 in total

Review 1.  Biological synthesis of circular polypeptides.

Authors:  Teshome L Aboye; Julio A Camarero
Journal:  J Biol Chem       Date:  2012-06-14       Impact factor: 5.157

2.  Development of a reporter peptide that catalytically produces a fluorescent signal through α-complementation.

Authors:  Kotaro Nishiyama; Norikazu Ichihashi; Yasuaki Kazuta; Tetsuya Yomo
Journal:  Protein Sci       Date:  2015-04-02       Impact factor: 6.725

3.  Segmental isotopic labeling of the Hsp70 molecular chaperone DnaK using expressed protein ligation.

Authors:  Eugenia M Clerico; Anastasia Zhuravleva; Robert G Smock; Lila M Gierasch
Journal:  Biopolymers       Date:  2010       Impact factor: 2.505

Review 4.  Cell-free biology: exploiting the interface between synthetic biology and synthetic chemistry.

Authors:  D Calvin Harris; Michael C Jewett
Journal:  Curr Opin Biotechnol       Date:  2012-04-04       Impact factor: 9.740

5.  Unnatural amino acids: better than the real things?

Authors:  Ellen C Minnihan; Kenichi Yokoyama; Joanne Stubbe
Journal:  F1000 Biol Rep       Date:  2009-11-26

Review 6.  Biology by design: from top to bottom and back.

Authors:  Brian R Fritz; Laura E Timmerman; Nichole M Daringer; Joshua N Leonard; Michael C Jewett
Journal:  J Biomed Biotechnol       Date:  2010-11-02

Review 7.  Protease-resistant peptide design-empowering nature's fragile warriors against HIV.

Authors:  Matthew T Weinstock; J Nicholas Francis; Joseph S Redman; Michael S Kay
Journal:  Biopolymers       Date:  2012       Impact factor: 2.505

8.  Diverse backbone-cyclized peptides via codon reprogramming.

Authors:  Takashi Kawakami; Atsushi Ohta; Masaki Ohuchi; Hiroshi Ashigai; Hiroshi Murakami; Hiroaki Suga
Journal:  Nat Chem Biol       Date:  2009-10-25       Impact factor: 15.040

Review 9.  Overcoming Challenges in Engineering the Genetic Code.

Authors:  M J Lajoie; D Söll; G M Church
Journal:  J Mol Biol       Date:  2015-09-05       Impact factor: 5.469

Review 10.  Recent progress toward the templated synthesis and directed evolution of sequence-defined synthetic polymers.

Authors:  Yevgeny Brudno; David R Liu
Journal:  Chem Biol       Date:  2009-03-27
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