Literature DB >> 22707722

Biological synthesis of circular polypeptides.

Teshome L Aboye1, Julio A Camarero.   

Abstract

Here, we review the use of different biochemical approaches for biological synthesis of circular or backbone-cyclized proteins and peptides. These methods allow the production of circular polypeptides either in vitro or in vivo using standard recombinant DNA expression techniques. Protein circularization can significantly impact protein engineering and research in protein folding. Basic polymer theory predicts that circularization should lead to a net thermodynamic stabilization of a folded protein by reducing the entropy associated with the unfolded state. Protein cyclization also provides a valuable tool for exploring the effects of topology on protein folding kinetics. Furthermore, the biological production of cyclic polypeptides makes possible the production of cyclic polypeptide libraries. The generation of such libraries, which was previously restricted to the domain of synthetic chemists, now offers biologists access to highly diverse and stable molecular libraries for probing protein structure and function.

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Year:  2012        PMID: 22707722      PMCID: PMC3411040          DOI: 10.1074/jbc.R111.305508

Source DB:  PubMed          Journal:  J Biol Chem        ISSN: 0021-9258            Impact factor:   5.157


  49 in total

1.  Circular beta-lactamase: stability enhancement by cyclizing the backbone.

Authors:  H Iwai; A Plückthun
Journal:  FEBS Lett       Date:  1999-10-08       Impact factor: 4.124

2.  Production of cyclic peptides and proteins in vivo.

Authors:  C P Scott; E Abel-Santos; M Wall; D C Wahnon; S J Benkovic
Journal:  Proc Natl Acad Sci U S A       Date:  1999-11-23       Impact factor: 11.205

3.  Protein synthesis by native chemical ligation: expanded scope by using straightforward methodology.

Authors:  T M Hackeng; J H Griffin; P E Dawson
Journal:  Proc Natl Acad Sci U S A       Date:  1999-08-31       Impact factor: 11.205

4.  Peptide chemical ligation inside living cells: in vivo generation of a circular protein domain.

Authors:  J A Camarero; D Fushman; D Cowburn; T W Muir
Journal:  Bioorg Med Chem       Date:  2001-09       Impact factor: 3.641

5.  Rescuing a destabilized protein fold through backbone cyclization.

Authors:  J A Camarero; D Fushman; S Sato; I Giriat; D Cowburn; D P Raleigh; T W Muir
Journal:  J Mol Biol       Date:  2001-05-18       Impact factor: 5.469

Review 6.  Synthesis of native proteins by chemical ligation.

Authors:  P E Dawson; S B Kent
Journal:  Annu Rev Biochem       Date:  2000       Impact factor: 23.643

Review 7.  Topology, stability, sequence, and length: defining the determinants of two-state protein folding kinetics.

Authors:  K W Plaxco; K T Simons; I Ruczinski; D Baker
Journal:  Biochemistry       Date:  2000-09-19       Impact factor: 3.162

Review 8.  Semisynthesis of proteins by expressed protein ligation.

Authors:  Tom W Muir
Journal:  Annu Rev Biochem       Date:  2003-02-27       Impact factor: 23.643

9.  Enzymatic cyclization of a potent bowman-birk protease inhibitor, sunflower trypsin inhibitor-1, and solution structure of an acyclic precursor peptide.

Authors:  Ute C Marx; Michael L J Korsinczky; Horst Joachim Schirra; Alun Jones; Barrie Condie; Laszlo Otvos; David J Craik
Journal:  J Biol Chem       Date:  2003-03-05       Impact factor: 5.157

10.  Cyclic green fluorescent protein produced in vivo using an artificially split PI-PfuI intein from Pyrococcus furiosus.

Authors:  H Iwai; A Lingel; A Pluckthun
Journal:  J Biol Chem       Date:  2001-02-13       Impact factor: 5.157

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  30 in total

1.  Ribosomal Synthesis of Macrocyclic Peptides in Vitro and in Vivo Mediated by Genetically Encoded Aminothiol Unnatural Amino Acids.

Authors:  John R Frost; Nicholas T Jacob; Louis J Papa; Andrew E Owens; Rudi Fasan
Journal:  ACS Chem Biol       Date:  2015-05-15       Impact factor: 5.100

2.  Butelase 1 is an Asx-specific ligase enabling peptide macrocyclization and synthesis.

Authors:  Giang K T Nguyen; Shujing Wang; Yibo Qiu; Xinya Hemu; Yilong Lian; James P Tam
Journal:  Nat Chem Biol       Date:  2014-07-20       Impact factor: 15.040

Review 3.  Intein applications: from protein purification and labeling to metabolic control methods.

Authors:  David W Wood; Julio A Camarero
Journal:  J Biol Chem       Date:  2014-04-02       Impact factor: 5.157

4.  In-cell production of a genetically-encoded library based on the θ-defensin RTD-1 using a bacterial expression system.

Authors:  Tao Bi; Yilong Li; Alexander Shekhtman; Julio A Camarero
Journal:  Bioorg Med Chem       Date:  2017-09-06       Impact factor: 3.641

5.  Efficient recombinant expression of SFTI-1 in bacterial cells using intein-mediated protein trans-splicing.

Authors:  Yilong Li; Teshome Aboye; Leonard Breindel; Alexander Shekhtman; Julio A Camarero
Journal:  Biopolymers       Date:  2016-11       Impact factor: 2.505

6.  Expression of fluorescent cyclotides using protein trans-splicing for easy monitoring of cyclotide-protein interactions.

Authors:  Krishnappa Jagadish; Radhika Borra; Vanessa Lacey; Subhabrata Majumder; Alexander Shekhtman; Lei Wang; Julio A Camarero
Journal:  Angew Chem Int Ed Engl       Date:  2013-01-15       Impact factor: 15.336

7.  Semienzymatic cyclization of disulfide-rich peptides using Sortase A.

Authors:  Xinying Jia; Soohyun Kwon; Ching-I Anderson Wang; Yen-Hua Huang; Lai Y Chan; Chia Chia Tan; K Johan Rosengren; Jason P Mulvenna; Christina I Schroeder; David J Craik
Journal:  J Biol Chem       Date:  2014-01-14       Impact factor: 5.157

8.  Chemical and biological production of cyclotides.

Authors:  Yilong Li; Tao Bi; Julio A Camarero
Journal:  Adv Bot Res       Date:  2015       Impact factor: 2.175

Review 9.  Recombinant expression of backbone-cyclized polypeptides.

Authors:  Radhika Borra; Julio A Camarero
Journal:  Biopolymers       Date:  2013-09       Impact factor: 2.505

10.  Secretion of circular proteins using sortase.

Authors:  Karin Strijbis; Hidde L Ploegh
Journal:  Methods Mol Biol       Date:  2014
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