Literature DB >> 17515604

A novel splicing factor, Yju2, is associated with NTC and acts after Prp2 in promoting the first catalytic reaction of pre-mRNA splicing.

Yen-Chi Liu1, Hsin-Chou Chen, Nan-Ying Wu, Soo-Chen Cheng.   

Abstract

The Prp19-associated complex (NTC) is essential for pre-mRNA splicing and is associated with the spliceosome during spliceosome activation. NTC is required for specifying interactions of U5 and U6 with pre-mRNA to stabilize their association with the spliceosome after dissociation of U4. Here, we show that a novel splicing factor, Yju2, is associated with components of NTC, and that it is required for pre-mRNA splicing both in vivo and in vitro. During spliceosome assembly, Yju2 is associated with the spliceosome at nearly the same time as NTC but is destabilized after the first catalytic reaction, whereas other NTC components remain associated until the reaction is complete. Extracts depleted of Yju2 could be complemented by recombinant Yju2, suggesting that Yju2 and NTC are not entirely in association with each other. Yju2 is not required for the binding of NTC to the spliceosome or for NTC-mediated spliceosome activation. Complementation analysis of the affinity-isolated spliceosome formed in Yju2-depleted extracts demonstrated that Yju2 acts in concert with an unidentified heat-resistant factor(s) in an ATP-independent manner to promote the first catalytic reaction of pre-mRNA splicing after Prp2-mediated structural rearrangement of the spliceosome.

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Year:  2007        PMID: 17515604      PMCID: PMC1952081          DOI: 10.1128/MCB.00346-07

Source DB:  PubMed          Journal:  Mol Cell Biol        ISSN: 0270-7306            Impact factor:   4.272


  46 in total

1.  Prp22, a DExH-box RNA helicase, plays two distinct roles in yeast pre-mRNA splicing.

Authors:  B Schwer; C H Gross
Journal:  EMBO J       Date:  1998-04-01       Impact factor: 11.598

Review 2.  Mechanical devices of the spliceosome: motors, clocks, springs, and things.

Authors:  J P Staley; C Guthrie
Journal:  Cell       Date:  1998-02-06       Impact factor: 41.582

Review 3.  Protein functions in pre-mRNA splicing.

Authors:  C L Will; R Lührmann
Journal:  Curr Opin Cell Biol       Date:  1997-06       Impact factor: 8.382

4.  Cef1p is a component of the Prp19p-associated complex and essential for pre-mRNA splicing.

Authors:  W Y Tsai; Y T Chow; H R Chen; K T Huang; R I Hong; S P Jan; N Y Kuo; T Y Tsao; C H Chen; S C Cheng
Journal:  J Biol Chem       Date:  1999-04-02       Impact factor: 5.157

5.  Functional and physical interaction between the yeast splicing factors Slu7 and Prp18.

Authors:  X Zhang; B Schwer
Journal:  Nucleic Acids Res       Date:  1997-06-01       Impact factor: 16.971

6.  Spliceosome activation by PRP2 ATPase prior to the first transesterification reaction of pre-mRNA splicing.

Authors:  S H Kim; R J Lin
Journal:  Mol Cell Biol       Date:  1996-12       Impact factor: 4.272

7.  Snt309p, a component of the Prp19p-associated complex that interacts with Prp19p and associates with the spliceosome simultaneously with or immediately after dissociation of U4 in the same manner as Prp19p.

Authors:  H R Chen; S P Jan; T Y Tsao; Y J Sheu; J Banroques; S C Cheng
Journal:  Mol Cell Biol       Date:  1998-04       Impact factor: 4.272

8.  Snt309p modulates interactions of Prp19p with its associated components to stabilize the Prp19p-associated complex essential for pre-mRNA splicing.

Authors:  H R Chen; T Y Tsao; C H Chen; W Y Tsai; L S Her; M M Hsu; S C Cheng
Journal:  Proc Natl Acad Sci U S A       Date:  1999-05-11       Impact factor: 11.205

9.  Characterization and functional ordering of Slu7p and Prp17p during the second step of pre-mRNA splicing in yeast.

Authors:  M H Jones; D N Frank; C Guthrie
Journal:  Proc Natl Acad Sci U S A       Date:  1995-10-10       Impact factor: 11.205

10.  The final stages of spliceosome maturation require Spp2p that can interact with the DEAH box protein Prp2p and promote step 1 of splicing.

Authors:  J Roy; K Kim; J R Maddock; J G Anthony; J L Woolford
Journal:  RNA       Date:  1995-06       Impact factor: 4.942

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  38 in total

1.  Prp2-mediated protein rearrangements at the catalytic core of the spliceosome as revealed by dcFCCS.

Authors:  Thomas Ohrt; Mira Prior; Julia Dannenberg; Peter Odenwälder; Olexandr Dybkov; Nicolas Rasche; Jana Schmitzová; Ingo Gregor; Patrizia Fabrizio; Jörg Enderlein; Reinhard Lührmann
Journal:  RNA       Date:  2012-04-25       Impact factor: 4.942

2.  Crystal structure of Cwc2 reveals a novel architecture of a multipartite RNA-binding protein.

Authors:  Jana Schmitzová; Nicolas Rasche; Olexander Dybkov; Katharina Kramer; Patrizia Fabrizio; Henning Urlaub; Reinhard Lührmann; Vladimir Pena
Journal:  EMBO J       Date:  2012-03-09       Impact factor: 11.598

3.  DEAH-box ATPase Prp16 has dual roles in remodeling of the spliceosome in catalytic steps.

Authors:  Chi-Kang Tseng; Hsueh-Lien Liu; Soo-Chen Cheng
Journal:  RNA       Date:  2010-11-22       Impact factor: 4.942

4.  Release of SF3 from the intron branchpoint activates the first step of pre-mRNA splicing.

Authors:  Rea M Lardelli; James X Thompson; John R Yates; Scott W Stevens
Journal:  RNA       Date:  2010-01-20       Impact factor: 4.942

5.  Cwc25 is a novel splicing factor required after Prp2 and Yju2 to facilitate the first catalytic reaction.

Authors:  Ying-Fang Chiu; Yen-Chi Liu; Ting-Wei Chiang; Tzu-Chi Yeh; Chi-Kang Tseng; Nan-Ying Wu; Soo-Chen Cheng
Journal:  Mol Cell Biol       Date:  2009-08-24       Impact factor: 4.272

6.  Reconstitution of both steps of Saccharomyces cerevisiae splicing with purified spliceosomal components.

Authors:  Zbigniew Warkocki; Peter Odenwälder; Jana Schmitzová; Florian Platzmann; Holger Stark; Henning Urlaub; Ralf Ficner; Patrizia Fabrizio; Reinhard Lührmann
Journal:  Nat Struct Mol Biol       Date:  2009-11-22       Impact factor: 15.369

7.  Ntc90 is required for recruiting first step factor Yju2 but not for spliceosome activation.

Authors:  Kae-Jiun Chang; Hsin-Chou Chen; Soo-Chen Cheng
Journal:  RNA       Date:  2009-07-17       Impact factor: 4.942

8.  The splice is right: guarantors of fidelity in pre-mRNA splicing.

Authors:  David S Horowitz
Journal:  RNA       Date:  2011-02-28       Impact factor: 4.942

Review 9.  Spliceosome structure and function.

Authors:  Cindy L Will; Reinhard Lührmann
Journal:  Cold Spring Harb Perspect Biol       Date:  2011-07-01       Impact factor: 10.005

10.  A weak spliceosome-binding domain of Yju2 functions in the first step and bypasses Prp16 in the second step of splicing.

Authors:  Ting-Wei Chiang; Soo-Chen Cheng
Journal:  Mol Cell Biol       Date:  2013-02-25       Impact factor: 4.272

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