Literature DB >> 9153314

Functional and physical interaction between the yeast splicing factors Slu7 and Prp18.

X Zhang1, B Schwer.   

Abstract

We show that the requirement for Prp18 during the second step of actin pre-mRNA splicing in vitro is dictated by the distance between the branch point and the 3'splice site. Prp18 is dispensable for splicing of precursor RNAs in which the interval between the branch point and 3'splice site is <12 nt. This resembles the requirement for another second step factor, Slu7. Excess Slu7 protein can bypass the need for Prp18 in vitro , suggesting that Slu7 and Prp18 function in a concerted manner. Physical interaction between Slu7 and Prp18 was demonstrated by using the two-hybrid assay. Deletion mutants of SLU7 were tested for their ability to support growth of a slu7 null strain. Removal of 199 amino acids from the N-terminus of the 382 amino acid Slu7 protein did not affect cell viability at 25 degrees C. A more extensive N-terminal deletion of 221 amino acids was lethal, as was a C-terminal deletion of 47 amino acids. Deleted versions of Slu7 were also tested for interaction with Prp18 in the two-hybrid system. We define a segment of Slu7 from residue 200 to 224 that is necessary for interaction with Prp18.

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Year:  1997        PMID: 9153314      PMCID: PMC146706          DOI: 10.1093/nar/25.11.2146

Source DB:  PubMed          Journal:  Nucleic Acids Res        ISSN: 0305-1048            Impact factor:   16.971


  31 in total

Review 1.  First glimpses at structure-function relationships of the nucleocapsid protein of retroviruses.

Authors:  J L Darlix; M Lapadat-Tapolsky; H de Rocquigny; B P Roques
Journal:  J Mol Biol       Date:  1995-12-08       Impact factor: 5.469

Review 2.  The second catalytic step of pre-mRNA splicing.

Authors:  J G Umen; C Guthrie
Journal:  RNA       Date:  1995-11       Impact factor: 4.942

3.  Activation of a cryptic TACTAAC box in the Saccharomyces cerevisiae actin intron.

Authors:  A Cellini; R Parker; J McMahon; C Guthrie; J Rossi
Journal:  Mol Cell Biol       Date:  1986-05       Impact factor: 4.272

4.  Mutagenesis of the yeast gene PRP8 reveals domains governing the specificity and fidelity of 3' splice site selection.

Authors:  J G Umen; C Guthrie
Journal:  Genetics       Date:  1996-06       Impact factor: 4.562

5.  Requirement for SLU7 in yeast pre-mRNA splicing is dictated by the distance between the branchpoint and the 3' splice site.

Authors:  A Brys; B Schwer
Journal:  RNA       Date:  1996-07       Impact factor: 4.942

6.  A human protein required for the second step of pre-mRNA splicing is functionally related to a yeast splicing factor.

Authors:  D S Horowitz; A R Krainer
Journal:  Genes Dev       Date:  1997-01-01       Impact factor: 11.361

7.  Effects on mRNA splicing of mutations in the 3' region of the Saccharomyces cerevisiae actin intron.

Authors:  L A Fouser; J D Friesen
Journal:  Mol Cell Biol       Date:  1987-01       Impact factor: 4.272

8.  Yeast mRNA splicing in vitro.

Authors:  R J Lin; A J Newman; S C Cheng; J Abelson
Journal:  J Biol Chem       Date:  1985-11-25       Impact factor: 5.157

9.  Characterization and functional ordering of Slu7p and Prp17p during the second step of pre-mRNA splicing in yeast.

Authors:  M H Jones; D N Frank; C Guthrie
Journal:  Proc Natl Acad Sci U S A       Date:  1995-10-10       Impact factor: 11.205

10.  SLU7 and a novel activity, SSF1, act during the PRP16-dependent step of yeast pre-mRNA splicing.

Authors:  A Ansari; B Schwer
Journal:  EMBO J       Date:  1995-08-15       Impact factor: 11.598

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  40 in total

1.  Evidence for a linear search in bimolecular 3' splice site AG selection.

Authors:  S Chen; K Anderson; M J Moore
Journal:  Proc Natl Acad Sci U S A       Date:  2000-01-18       Impact factor: 11.205

2.  Identification of a U2/U6 helix la mutant that influences 3' splice site selection during nuclear pre-mRNA splicing.

Authors:  J S Chang; D S McPheeters
Journal:  RNA       Date:  2000-08       Impact factor: 4.942

3.  Spatial organization of protein-RNA interactions in the branch site-3' splice site region during pre-mRNA splicing in yeast.

Authors:  David S McPheeters; Peggy Muhlenkamp
Journal:  Mol Cell Biol       Date:  2003-06       Impact factor: 4.272

4.  Splicing factor hSlu7 contains a unique functional domain required to retain the protein within the nucleus.

Authors:  Noam Shomron; Mika Reznik; Gil Ast
Journal:  Mol Biol Cell       Date:  2004-06-04       Impact factor: 4.138

5.  A novel splicing factor, Yju2, is associated with NTC and acts after Prp2 in promoting the first catalytic reaction of pre-mRNA splicing.

Authors:  Yen-Chi Liu; Hsin-Chou Chen; Nan-Ying Wu; Soo-Chen Cheng
Journal:  Mol Cell Biol       Date:  2007-05-21       Impact factor: 4.272

6.  Conservation of functional domains involved in RNA binding and protein-protein interactions in human and Saccharomyces cerevisiae pre-mRNA splicing factor SF1.

Authors:  J C Rain; Z Rafi; Z Rhani; P Legrain; A Krämer
Journal:  RNA       Date:  1998-05       Impact factor: 4.942

7.  Cwc25 is a novel splicing factor required after Prp2 and Yju2 to facilitate the first catalytic reaction.

Authors:  Ying-Fang Chiu; Yen-Chi Liu; Ting-Wei Chiang; Tzu-Chi Yeh; Chi-Kang Tseng; Nan-Ying Wu; Soo-Chen Cheng
Journal:  Mol Cell Biol       Date:  2009-08-24       Impact factor: 4.272

8.  Exon sequences at the splice junctions affect splicing fidelity and alternative splicing.

Authors:  Luciana B Crotti; David S Horowitz
Journal:  Proc Natl Acad Sci U S A       Date:  2009-10-23       Impact factor: 11.205

9.  Genetic and functional interaction of evolutionarily conserved regions of the Prp18 protein and the U5 snRNA.

Authors:  Dagmar Bacíková; David S Horowitz
Journal:  Mol Cell Biol       Date:  2005-03       Impact factor: 4.272

10.  Spliceosome Profiling Visualizes Operations of a Dynamic RNP at Nucleotide Resolution.

Authors:  Jordan E Burke; Adam D Longhurst; Daria Merkurjev; Jade Sales-Lee; Beiduo Rao; James J Moresco; John R Yates; Jingyi Jessica Li; Hiten D Madhani
Journal:  Cell       Date:  2018-05-03       Impact factor: 41.582

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