Literature DB >> 21441581

Spliceosome structure and function.

Cindy L Will1, Reinhard Lührmann.   

Abstract

Pre-mRNA splicing is catalyzed by the spliceosome, a multimegadalton ribonucleoprotein (RNP) complex comprised of five snRNPs and numerous proteins. Intricate RNA-RNA and RNP networks, which serve to align the reactive groups of the pre-mRNA for catalysis, are formed and repeatedly rearranged during spliceosome assembly and catalysis. Both the conformation and composition of the spliceosome are highly dynamic, affording the splicing machinery its accuracy and flexibility, and these remarkable dynamics are largely conserved between yeast and metazoans. Because of its dynamic and complex nature, obtaining structural information about the spliceosome represents a major challenge. Electron microscopy has revealed the general morphology of several spliceosomal complexes and their snRNP subunits, and also the spatial arrangement of some of their components. X-ray and NMR studies have provided high resolution structure information about spliceosomal proteins alone or complexed with one or more binding partners. The extensive interplay of RNA and proteins in aligning the pre-mRNA's reactive groups, and the presence of both RNA and protein at the core of the splicing machinery, suggest that the spliceosome is an RNP enzyme. However, elucidation of the precise nature of the spliceosome's active site, awaits the generation of a high-resolution structure of its RNP core.

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Year:  2011        PMID: 21441581      PMCID: PMC3119917          DOI: 10.1101/cshperspect.a003707

Source DB:  PubMed          Journal:  Cold Spring Harb Perspect Biol        ISSN: 1943-0264            Impact factor:   10.005


  152 in total

1.  Crystal structures of two Sm protein complexes and their implications for the assembly of the spliceosomal snRNPs.

Authors:  C Kambach; S Walke; R Young; J M Avis; E de la Fortelle; V A Raker; R Lührmann; J Li; K Nagai
Journal:  Cell       Date:  1999-02-05       Impact factor: 41.582

2.  An RNA switch at the 5' splice site requires ATP and the DEAD box protein Prp28p.

Authors:  J P Staley; C Guthrie
Journal:  Mol Cell       Date:  1999-01       Impact factor: 17.970

Review 3.  RNA splicing: What has phosphorylation got to do with it?

Authors:  T Misteli
Journal:  Curr Biol       Date:  1999-03-25       Impact factor: 10.834

Review 4.  Structure and assembly of the spliceosomal small nuclear ribonucleoprotein particles.

Authors:  C Kambach; S Walke; K Nagai
Journal:  Curr Opin Struct Biol       Date:  1999-04       Impact factor: 6.809

5.  U2-U6 RNA folding reveals a group II intron-like domain and a four-helix junction.

Authors:  Dipali G Sashital; Gabriel Cornilescu; C Joel McManus; David A Brow; Samuel E Butcher
Journal:  Nat Struct Mol Biol       Date:  2004-11-14       Impact factor: 15.369

6.  Identification of alternative splicing regulators by RNA interference in Drosophila.

Authors:  Jung W Park; Katherine Parisky; Alicia M Celotto; Robert A Reenan; Brenton R Graveley
Journal:  Proc Natl Acad Sci U S A       Date:  2004-10-18       Impact factor: 11.205

7.  Intron-exon structures of eukaryotic model organisms.

Authors:  M Deutsch; M Long
Journal:  Nucleic Acids Res       Date:  1999-08-01       Impact factor: 16.971

8.  Crystal structure of the spliceosomal U2B"-U2A' protein complex bound to a fragment of U2 small nuclear RNA.

Authors:  S R Price; P R Evans; K Nagai
Journal:  Nature       Date:  1998-08-13       Impact factor: 49.962

9.  A pathway of sequential arginine-serine-rich domain-splicing signal interactions during mammalian spliceosome assembly.

Authors:  Haihong Shen; Michael R Green
Journal:  Mol Cell       Date:  2004-11-05       Impact factor: 17.970

10.  Interaction between a G-patch protein and a spliceosomal DEXD/H-box ATPase that is critical for splicing.

Authors:  Edward J Silverman; Ayaka Maeda; Janet Wei; Paul Smith; Jean D Beggs; Ren-Jang Lin
Journal:  Mol Cell Biol       Date:  2004-12       Impact factor: 4.272

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  594 in total

Review 1.  The RNA Base-Pairing Problem and Base-Pairing Solutions.

Authors:  Zhipeng Lu; Howard Y Chang
Journal:  Cold Spring Harb Perspect Biol       Date:  2018-12-03       Impact factor: 10.005

Review 2.  Beyond DNA origami: the unfolding prospects of nucleic acid nanotechnology.

Authors:  Nicole Michelotti; Alexander Johnson-Buck; Anthony J Manzo; Nils G Walter
Journal:  Wiley Interdiscip Rev Nanomed Nanobiotechnol       Date:  2011-11-30

3.  Structure and assembly of the SF3a splicing factor complex of U2 snRNP.

Authors:  Pei-Chun Lin; Rui-Ming Xu
Journal:  EMBO J       Date:  2012-02-07       Impact factor: 11.598

4.  Crystal structure of Cwc2 reveals a novel architecture of a multipartite RNA-binding protein.

Authors:  Jana Schmitzová; Nicolas Rasche; Olexander Dybkov; Katharina Kramer; Patrizia Fabrizio; Henning Urlaub; Reinhard Lührmann; Vladimir Pena
Journal:  EMBO J       Date:  2012-03-09       Impact factor: 11.598

Review 5.  Noncoding RNPs of viral origin.

Authors:  Joan Steitz; Sumit Borah; Demian Cazalla; Victor Fok; Robin Lytle; Rachel Mitton-Fry; Kasandra Riley; Tasleem Samji
Journal:  Cold Spring Harb Perspect Biol       Date:  2011-03-01       Impact factor: 10.005

6.  Enantioselective Synthesis of Spliceostatin G and Evaluation of Bioactivity of Spliceostatin G and Its Methyl Ester.

Authors:  Arun K Ghosh; Guddeti Chandrashekar Reddy; Andrew J MacRae; Melissa S Jurica
Journal:  Org Lett       Date:  2017-12-08       Impact factor: 6.005

7.  SPLICING FACTOR1 Is Important in Chloroplast Development under Cold Stress.

Authors:  Yajuan Zhu; Wenjuan Wu; Wei Shao; Jingli Chen; Xiaoning Shi; Xiaoyu Ma; Yong-Zhen Xu; Weihua Huang; Jirong Huang
Journal:  Plant Physiol       Date:  2020-07-30       Impact factor: 8.340

Review 8.  Targeting RNA in mammalian systems with small molecules.

Authors:  Anita Donlic; Amanda E Hargrove
Journal:  Wiley Interdiscip Rev RNA       Date:  2018-05-03       Impact factor: 9.957

9.  HITS-CLIP reveals sex-differential RNA binding and alterative splicing regulation of SRm160 in Drosophila.

Authors:  Chen Qiu; Yu Zhang; Yu-Jie Fan; Ting-Lin Pang; Yan Su; Shuai Zhan; Yong-Zhen Xu
Journal:  J Mol Cell Biol       Date:  2019-02-01       Impact factor: 6.216

10.  Brahma regulates a specific trans-splicing event at the mod(mdg4) locus of Drosophila melanogaster.

Authors:  Simei Yu; Johan Waldholm; Stefanie Böhm; Neus Visa
Journal:  RNA Biol       Date:  2014-02-06       Impact factor: 4.652

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