Literature DB >> 17483432

Beneficial mutation selection balance and the effect of linkage on positive selection.

Michael M Desai1, Daniel S Fisher.   

Abstract

When beneficial mutations are rare, they accumulate by a series of selective sweeps. But when they are common, many beneficial mutations will occur before any can fix, so there will be many different mutant lineages in the population concurrently. In an asexual population, these different mutant lineages interfere and not all can fix simultaneously. In addition, further beneficial mutations can accumulate in mutant lineages while these are still a minority of the population. In this article, we analyze the dynamics of such multiple mutations and the interplay between multiple mutations and interference between clones. These result in substantial variation in fitness accumulating within a single asexual population. The amount of variation is determined by a balance between selection, which destroys variation, and beneficial mutations, which create more. The behavior depends in a subtle way on the population parameters: the population size, the beneficial mutation rate, and the distribution of the fitness increments of the potential beneficial mutations. The mutation-selection balance leads to a continually evolving population with a steady-state fitness variation. This variation increases logarithmically with both population size and mutation rate and sets the rate at which the population accumulates beneficial mutations, which thus also grows only logarithmically with population size and mutation rate. These results imply that mutator phenotypes are less effective in larger asexual populations. They also have consequences for the advantages (or disadvantages) of sex via the Fisher-Muller effect; these are discussed briefly.

Mesh:

Year:  2007        PMID: 17483432      PMCID: PMC1931526          DOI: 10.1534/genetics.106.067678

Source DB:  PubMed          Journal:  Genetics        ISSN: 0016-6731            Impact factor:   4.562


  29 in total

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Authors:  Yuseob Kim; Wolfgang Stephan
Journal:  Genetics       Date:  2003-05       Impact factor: 4.562

2.  Mutational effects on the clonal interference phenomenon.

Authors:  Paulo R A Campos; Viviane M de Oliveira
Journal:  Evolution       Date:  2004-05       Impact factor: 3.694

3.  The fate of competing beneficial mutations in an asexual population.

Authors:  P J Gerrish; R E Lenski
Journal:  Genetica       Date:  1998       Impact factor: 1.082

4.  Natural selection on synonymous sites is correlated with gene length and recombination in Drosophila.

Authors:  J M Comeron; M Kreitman; M Aguadé
Journal:  Genetics       Date:  1999-01       Impact factor: 4.562

5.  The evolution of recombination: removing the limits to natural selection.

Authors:  S P Otto; N H Barton
Journal:  Genetics       Date:  1997-10       Impact factor: 4.562

6.  The evolutionary advantage of recombination.

Authors:  J Felsenstein
Journal:  Genetics       Date:  1974-10       Impact factor: 4.562

7.  What use is sex?

Authors:  J M Smith
Journal:  J Theor Biol       Date:  1971-02       Impact factor: 2.691

8.  Models of nearly neutral mutations with particular implications for nonrandom usage of synonymous codons.

Authors:  W H Li
Journal:  J Mol Evol       Date:  1987       Impact factor: 2.395

9.  Linkage and the limits to natural selection.

Authors:  N H Barton
Journal:  Genetics       Date:  1995-06       Impact factor: 4.562

10.  The effect of linkage on limits to artificial selection.

Authors:  W G Hill; A Robertson
Journal:  Genet Res       Date:  1966-12       Impact factor: 1.588

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  207 in total

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Authors:  Aleksandra M Walczak; Lauren E Nicolaisen; Joshua B Plotkin; Michael M Desai
Journal:  Genetics       Date:  2011-11-30       Impact factor: 4.562

2.  Distribution of fixed beneficial mutations and the rate of adaptation in asexual populations.

Authors:  Benjamin H Good; Igor M Rouzine; Daniel J Balick; Oskar Hallatschek; Michael M Desai
Journal:  Proc Natl Acad Sci U S A       Date:  2012-02-27       Impact factor: 11.205

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Journal:  Proc Natl Acad Sci U S A       Date:  2012-03-12       Impact factor: 11.205

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Journal:  Proc Natl Acad Sci U S A       Date:  2010-09-07       Impact factor: 11.205

Review 6.  Beneficial mutations and the dynamics of adaptation in asexual populations.

Authors:  Paul D Sniegowski; Philip J Gerrish
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2010-04-27       Impact factor: 6.237

7.  The population genetics of mutations: good, bad and indifferent.

Authors:  Laurence Loewe; William G Hill
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2010-04-27       Impact factor: 6.237

8.  Mutational effects and population dynamics during viral adaptation challenge current models.

Authors:  Craig R Miller; Paul Joyce; Holly A Wichman
Journal:  Genetics       Date:  2010-11-01       Impact factor: 4.562

9.  The noisy edge of traveling waves.

Authors:  Oskar Hallatschek
Journal:  Proc Natl Acad Sci U S A       Date:  2010-12-27       Impact factor: 11.205

10.  Collective Fluctuations in the Dynamics of Adaptation and Other Traveling Waves.

Authors:  Oskar Hallatschek; Lukas Geyrhofer
Journal:  Genetics       Date:  2016-01-27       Impact factor: 4.562

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