Literature DB >> 17360617

Concerted ATP-induced allosteric transitions in GroEL facilitate release of protein substrate domains in an all-or-none manner.

Yakov Kipnis1, Niv Papo, Gilad Haran, Amnon Horovitz.   

Abstract

The double-ring chaperonin GroEL mediates protein folding, in conjunction with its helper protein GroES, by undergoing ATP-induced conformational changes that are concerted within each heptameric ring. Here we have examined whether the concerted nature of these transitions is responsible for protein substrate release in an all-or-none manner. Two chimeric substrates were designed, each with two different reporter activities that were recovered after denaturation in GroES-dependent and independent fashions, respectively. The refolding of the chimeras was monitored in the presence of GroEL variants that undergo ATP-induced intraring conformational changes that are either sequential (F44W/D155A) or concerted (F44W). Our results show that release of a protein substrate from GroEL in a domain-by-domain fashion is favored when the intraring allosteric transitions of GroEL are sequential and not concerted.

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Year:  2007        PMID: 17360617      PMCID: PMC1805612          DOI: 10.1073/pnas.0700070104

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  29 in total

1.  Synchronized domain-opening motion of GroEL is essential for communication between the two rings.

Authors:  K Shiseki; N Murai; F Motojima; T Hisabori; M Yoshida; H Taguchi
Journal:  J Biol Chem       Date:  2001-01-03       Impact factor: 5.157

Review 2.  Chaperonin-mediated protein folding.

Authors:  D Thirumalai; G H Lorimer
Journal:  Annu Rev Biophys Biomol Struct       Date:  2001

3.  Encapsulation of an 86-kDa assembly intermediate inside the cavities of GroEL and its single-ring variant SR1 by GroES.

Authors:  Jiu-Li Song; Jun Li; Yi-Shuian Huang; David T Chuang
Journal:  J Biol Chem       Date:  2002-11-12       Impact factor: 5.157

4.  Folding with and without encapsulation by cis- and trans-only GroEL-GroES complexes.

Authors:  George W Farr; Wayne A Fenton; Tapan K Chaudhuri; Daniel K Clare; Helen R Saibil; Arthur L Horwich
Journal:  EMBO J       Date:  2003-07-01       Impact factor: 11.598

5.  Single-molecule surface enhanced resonance Raman spectroscopy of the enhanced green fluorescent protein.

Authors:  Satoshi Habuchi; Mircea Cotlet; Roel Gronheid; Gunter Dirix; Jan Michiels; Jos Vanderleyden; Frans C De Schryver; Johan Hofkens
Journal:  J Am Chem Soc       Date:  2003-07-16       Impact factor: 15.419

6.  Conversion of the allosteric transition of GroEL from concerted to sequential by the single mutation Asp-155 -> Ala.

Authors:  Oded Danziger; Dalia Rivenzon-Segal; Sharon G Wolf; Amnon Horovitz
Journal:  Proc Natl Acad Sci U S A       Date:  2003-11-13       Impact factor: 11.205

7.  A T5 promoter-based transcription-translation system for the analysis of proteins in vitro and in vivo.

Authors:  H Bujard; R Gentz; M Lanzer; D Stueber; M Mueller; I Ibrahimi; M T Haeuptle; B Dobberstein
Journal:  Methods Enzymol       Date:  1987       Impact factor: 1.600

8.  Chaperonins facilitate the in vitro folding of monomeric mitochondrial rhodanese.

Authors:  J A Mendoza; E Rogers; G H Lorimer; P M Horowitz
Journal:  J Biol Chem       Date:  1991-07-15       Impact factor: 5.157

9.  Structure of bovine liver rhodanese. I. Structure determination at 2.5 A resolution and a comparison of the conformation and sequence of its two domains.

Authors:  J H Ploegman; G Drent; K H Kalk; W G Hol
Journal:  J Mol Biol       Date:  1978-08-25       Impact factor: 5.469

10.  Comparison of experimental binding data and theoretical models in proteins containing subunits.

Authors:  D E Koshland; G Némethy; D Filmer
Journal:  Biochemistry       Date:  1966-01       Impact factor: 3.162

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  9 in total

1.  Kinetic model for the coupling between allosteric transitions in GroEL and substrate protein folding and aggregation.

Authors:  Riina Tehver; D Thirumalai
Journal:  J Mol Biol       Date:  2008-01-31       Impact factor: 5.469

2.  Concerted release of substrate domains from GroEL by ATP is demonstrated with FRET.

Authors:  Niv Papo; Yakov Kipnis; Gilad Haran; Amnon Horovitz
Journal:  J Mol Biol       Date:  2008-05-17       Impact factor: 5.469

3.  Weak intra-ring allosteric communications of the archaeal chaperonin thermosome revealed by normal mode analysis.

Authors:  Manori Jayasinghe; Pooja Shrestha; Xiongwu Wu; Riina Tehver; George Stan
Journal:  Biophys J       Date:  2012-09-19       Impact factor: 4.033

4.  GroEL and CCT are catalytic unfoldases mediating out-of-cage polypeptide refolding without ATP.

Authors:  Smriti Priya; Sandeep Kumar Sharma; Vishal Sood; Rayees U H Mattoo; Andrija Finka; Abdussalam Azem; Paolo De Los Rios; Pierre Goloubinoff
Journal:  Proc Natl Acad Sci U S A       Date:  2013-04-12       Impact factor: 11.205

5.  Folding and assembly defects of pyruvate dehydrogenase deficiency-related variants in the E1α subunit of the pyruvate dehydrogenase complex.

Authors:  Srdja Drakulic; Jay Rai; Steen Vang Petersen; Monika M Golas; Bjoern Sander
Journal:  Cell Mol Life Sci       Date:  2018-02-14       Impact factor: 9.261

6.  Facilitated oligomerization of mycobacterial GroEL: evidence for phosphorylation-mediated oligomerization.

Authors:  C M Santosh Kumar; Garima Khare; C V Srikanth; Anil K Tyagi; Abhijit A Sardesai; Shekhar C Mande
Journal:  J Bacteriol       Date:  2009-08-28       Impact factor: 3.490

Review 7.  The GroEL/GroES cis cavity as a passive anti-aggregation device.

Authors:  Arthur L Horwich; Adrian C Apetri; Wayne A Fenton
Journal:  FEBS Lett       Date:  2009-07-03       Impact factor: 4.124

8.  Bacterial expression strategies for several Sus scrofa diacylglycerol kinase alpha constructs: solubility challenges.

Authors:  Elizabeth J Petro; Daniel M Raben
Journal:  Sci Rep       Date:  2013       Impact factor: 4.379

9.  Structural insight into the cooperation of chloroplast chaperonin subunits.

Authors:  Shijia Zhang; Huan Zhou; Feng Yu; Cuicui Bai; Qian Zhao; Jianhua He; Cuimin Liu
Journal:  BMC Biol       Date:  2016-04-12       Impact factor: 7.431

  9 in total

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