Literature DB >> 18556021

Concerted release of substrate domains from GroEL by ATP is demonstrated with FRET.

Niv Papo1, Yakov Kipnis, Gilad Haran, Amnon Horovitz.   

Abstract

The chaperonin GroEL assists protein folding by undergoing ATP-induced conformational changes that are concerted within each of its two back-to-back stacked rings. Here we examined whether concerted allosteric switching gives rise to all-or-none release and folding of domains in a chimeric fluorescent protein substrate, CyPet-YPet. Using this substrate, it was possible to determine the folding yield of each domain from its intrinsic fluorescence and that of the entire chimera by measuring Förster resonance energy transfer between the two domains. Hence, it was possible to determine whether release of one domain is accompanied by release of the other domain (concerted mechanism), or whether their release is not coupled. Our results show that the chimera's release tends to be concerted when folding is assisted by a wild-type GroEL variant, but not when assisted by the F44W/D155A mutant that undergoes a sequential allosteric switch. A connection between the allosteric mechanism of this molecular machine and its biological function in assisting folding is thus established.

Entities:  

Mesh:

Substances:

Year:  2008        PMID: 18556021      PMCID: PMC2504006          DOI: 10.1016/j.jmb.2008.05.021

Source DB:  PubMed          Journal:  J Mol Biol        ISSN: 0022-2836            Impact factor:   5.469


  24 in total

1.  Synchronized domain-opening motion of GroEL is essential for communication between the two rings.

Authors:  K Shiseki; N Murai; F Motojima; T Hisabori; M Yoshida; H Taguchi
Journal:  J Biol Chem       Date:  2001-01-03       Impact factor: 5.157

Review 2.  Allostery and protein substrate conformational change during GroEL/GroES-mediated protein folding.

Authors:  H R Saibil; A L Horwich; W A Fenton
Journal:  Adv Protein Chem       Date:  2001

3.  Conversion of the allosteric transition of GroEL from concerted to sequential by the single mutation Asp-155 -> Ala.

Authors:  Oded Danziger; Dalia Rivenzon-Segal; Sharon G Wolf; Amnon Horovitz
Journal:  Proc Natl Acad Sci U S A       Date:  2003-11-13       Impact factor: 11.205

4.  Different mechanistic requirements for prokaryotic and eukaryotic chaperonins: a lattice study.

Authors:  Etai Jacob; Amnon Horovitz; Ron Unger
Journal:  Bioinformatics       Date:  2007-07-01       Impact factor: 6.937

5.  Strategy for analysing the co-operativity of intramolecular interactions in peptides and proteins.

Authors:  A Horovitz; A R Fersht
Journal:  J Mol Biol       Date:  1990-08-05       Impact factor: 5.469

6.  Recombination of protein domains facilitated by co-translational folding in eukaryotes.

Authors:  W J Netzer; F U Hartl
Journal:  Nature       Date:  1997-07-24       Impact factor: 49.962

7.  Nested cooperativity in the ATPase activity of the oligomeric chaperonin GroEL.

Authors:  O Yifrach; A Horovitz
Journal:  Biochemistry       Date:  1995-04-25       Impact factor: 3.162

8.  Allosteric control by ATP of non-folded protein binding to GroEL.

Authors:  O Yifrach; A Horovitz
Journal:  J Mol Biol       Date:  1996-01-26       Impact factor: 5.469

9.  The crystal structure of the bacterial chaperonin GroEL at 2.8 A.

Authors:  K Braig; Z Otwinowski; R Hegde; D C Boisvert; A Joachimiak; A L Horwich; P B Sigler
Journal:  Nature       Date:  1994-10-13       Impact factor: 49.962

10.  On the role of groES in the chaperonin-assisted folding reaction. Three case studies.

Authors:  M Schmidt; J Buchner; M J Todd; G H Lorimer; P V Viitanen
Journal:  J Biol Chem       Date:  1994-04-08       Impact factor: 5.157

View more
  6 in total

1.  Common crowding agents have only a small effect on protein-protein interactions.

Authors:  Yael Phillip; Eilon Sherman; Gilad Haran; Gideon Schreiber
Journal:  Biophys J       Date:  2009-08-05       Impact factor: 4.033

2.  Sequential allosteric mechanism of ATP hydrolysis by the CCT/TRiC chaperone is revealed through Arrhenius analysis.

Authors:  Ranit Gruber; Michael Levitt; Amnon Horovitz
Journal:  Proc Natl Acad Sci U S A       Date:  2017-05-01       Impact factor: 11.205

3.  Weak intra-ring allosteric communications of the archaeal chaperonin thermosome revealed by normal mode analysis.

Authors:  Manori Jayasinghe; Pooja Shrestha; Xiongwu Wu; Riina Tehver; George Stan
Journal:  Biophys J       Date:  2012-09-19       Impact factor: 4.033

Review 4.  Unpicking allosteric mechanisms of homo-oligomeric proteins by determining their successive ligand binding constants.

Authors:  Ranit Gruber; Amnon Horovitz
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2018-06-19       Impact factor: 6.237

Review 5.  The GroEL/GroES cis cavity as a passive anti-aggregation device.

Authors:  Arthur L Horwich; Adrian C Apetri; Wayne A Fenton
Journal:  FEBS Lett       Date:  2009-07-03       Impact factor: 4.124

6.  Replacement of GroEL in Escherichia coli by the Group II Chaperonin from the Archaeon Methanococcus maripaludis.

Authors:  Riddhi Shah; Andrew T Large; Astrid Ursinus; Bevan Lin; Preethy Gowrinathan; Jörg Martin; Peter A Lund
Journal:  J Bacteriol       Date:  2016-09-09       Impact factor: 3.490

  6 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.