Literature DB >> 17216304

Three-dimensional experiment for solid-state NMR of aligned protein samples in high field magnets.

Alexander A Nevzorov1, Sang Ho Park, Stanley J Opella.   

Abstract

A pulse sequence that yields three-dimensional (1)H chemical shift/(1)H-(15)N heteronuclear dipolar coupling/(15)N chemical shift solid-state NMR spectra is demonstrated on a uniformly (15)N labeled membrane protein in magnetically aligned phospholipid bilayers. Based on SAMPI4, the pulse sequence yields high resolution in all three dimensions at a (1)H resonance frequency of 900 MHz with the relatively low rf field strength (33 kHz) available for a lossy aqueous sample with a commercial spectrometer and probe. The (1)H chemical shift frequency dimension is shown to select among amide resonances, which will be useful in studies of larger polytopic membrane proteins where the resonances overlap in two-dimensional spectra. Moreover, the (1)H chemical shift, which can be measured from these spectra, provides an additional orientationally dependent frequency as input for structure calculations.

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Year:  2007        PMID: 17216304     DOI: 10.1007/s10858-006-9121-y

Source DB:  PubMed          Journal:  J Biomol NMR        ISSN: 0925-2738            Impact factor:   2.835


  16 in total

1.  Imaging membrane protein helical wheels.

Authors:  J Wang; J Denny; C Tian; S Kim; Y Mo; F Kovacs; Z Song; K Nishimura; Z Gan; R Fu; J R Quine; T A Cross
Journal:  J Magn Reson       Date:  2000-05       Impact factor: 2.229

2.  A "magic sandwich" pulse sequence with reduced offset dependence for high-resolution separated local field spectroscopy.

Authors:  Alexander A Nevzorov; Stanley J Opella
Journal:  J Magn Reson       Date:  2003-09       Impact factor: 2.229

3.  High-resolution NMR spectroscopy of a GPCR in aligned bicelles.

Authors:  Sang Ho Park; Stefan Prytulla; Anna A De Angelis; Jonathan Miles Brown; Hans Kiefer; Stanley J Opella
Journal:  J Am Chem Soc       Date:  2006-06-14       Impact factor: 15.419

4.  Application of Maximum Entropy reconstruction to PISEMA spectra.

Authors:  D H Jones; S J Opella
Journal:  J Magn Reson       Date:  2005-12-15       Impact factor: 2.229

5.  Structure determination of a membrane protein with two trans-membrane helices in aligned phospholipid bicelles by solid-state NMR spectroscopy.

Authors:  Anna A De Angelis; Stanley C Howell; Alexander A Nevzorov; Stanley J Opella
Journal:  J Am Chem Soc       Date:  2006-09-20       Impact factor: 15.419

6.  Selective averaging for high-resolution solid-state NMR spectroscopy of aligned samples.

Authors:  Alexander A Nevzorov; Stanley J Opella
Journal:  J Magn Reson       Date:  2006-10-30       Impact factor: 2.229

7.  An improved broadband decoupling sequence for liquid crystals and solids.

Authors:  B M Fung; A K Khitrin; K Ermolaev
Journal:  J Magn Reson       Date:  2000-01       Impact factor: 2.229

8.  SPINAL modulated decoupling in high field double- and triple-resonance solid-state NMR experiments on stationary samples.

Authors:  Neeraj Sinha; Christopher V Grant; Chin H Wu; Anna A De Angelis; Stanley C Howell; Stanley J Opella
Journal:  J Magn Reson       Date:  2005-08-30       Impact factor: 2.229

9.  Three-dimensional structure of the transmembrane domain of Vpu from HIV-1 in aligned phospholipid bicelles.

Authors:  Sang Ho Park; Anna A De Angelis; Alexander A Nevzorov; Chin H Wu; Stanley J Opella
Journal:  Biophys J       Date:  2006-07-21       Impact factor: 4.033

10.  Structure of the coat protein in Pf1 bacteriophage determined by solid-state NMR spectroscopy.

Authors:  David S Thiriot; Alexander A Nevzorov; Lena Zagyanskiy; Chin H Wu; Stanley J Opella
Journal:  J Mol Biol       Date:  2004-08-13       Impact factor: 5.469

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  9 in total

1.  Structure and dynamics of the membrane-bound form of Pf1 coat protein: implications of structural rearrangement for virus assembly.

Authors:  Sang Ho Park; Francesca M Marassi; David Black; Stanley J Opella
Journal:  Biophys J       Date:  2010-09-08       Impact factor: 4.033

2.  Sensitivity enhancement of separated local field experiments: application to membrane proteins.

Authors:  T Gopinath; Raffaello Verardi; Nathaniel J Traaseth; Gianluigi Veglia
Journal:  J Phys Chem B       Date:  2010-04-22       Impact factor: 2.991

3.  Simultaneous acquisition of 2D and 3D solid-state NMR experiments for sequential assignment of oriented membrane protein samples.

Authors:  T Gopinath; Kaustubh R Mote; Gianluigi Veglia
Journal:  J Biomol NMR       Date:  2015-03-07       Impact factor: 2.835

4.  A general assignment method for oriented sample (OS) solid-state NMR of proteins based on the correlation of resonances through heteronuclear dipolar couplings in samples aligned parallel and perpendicular to the magnetic field.

Authors:  George J Lu; Woo Sung Son; Stanley J Opella
Journal:  J Magn Reson       Date:  2011-01-21       Impact factor: 2.229

5.  Improved 1H amide resonance line narrowing in oriented sample solid-state NMR of membrane proteins in phospholipid bilayers.

Authors:  George J Lu; Sang Ho Park; Stanley J Opella
Journal:  J Magn Reson       Date:  2012-04-26       Impact factor: 2.229

6.  Microwave field distribution in a magic angle spinning dynamic nuclear polarization NMR probe.

Authors:  Emilio A Nanni; Alexander B Barnes; Yoh Matsuki; Paul P Woskov; Björn Corzilius; Robert G Griffin; Richard J Temkin
Journal:  J Magn Reson       Date:  2011-03-05       Impact factor: 2.229

7.  1H assisted 13C/15N heteronuclear correlation spectroscopy in oriented sample solid-state NMR of single crystal and magnetically aligned samples.

Authors:  Eugene C Lin; Stanley J Opella
Journal:  J Magn Reson       Date:  2011-04-09       Impact factor: 2.229

8.  Probing membrane topology of the antimicrobial peptide distinctin by solid-state NMR spectroscopy in zwitterionic and charged lipid bilayers.

Authors:  Raffaello Verardi; Nathaniel J Traaseth; Lei Shi; Fernando Porcelli; Luca Monfregola; Stefania De Luca; Pietro Amodeo; Gianluigi Veglia; Andrea Scaloni
Journal:  Biochim Biophys Acta       Date:  2010-08-16

9.  Continuously Tunable 250 GHz Gyrotron with a Double Disk Window for DNP-NMR Spectroscopy.

Authors:  Sudheer Jawla; Qing Zhe Ni; Alexander Barnes; William Guss; Eugenio Daviso; Judith Herzfeld; Robert Griffin; Richard Temkin
Journal:  J Infrared Millim Terahertz Waves       Date:  2012-11-15       Impact factor: 1.768

  9 in total

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