Literature DB >> 16343957

Application of Maximum Entropy reconstruction to PISEMA spectra.

D H Jones1, S J Opella.   

Abstract

Maximum Entropy reconstruction is applied to two-dimensional PISEMA spectra of stationary samples of peptide crystals and proteins in magnetically aligned virus particles and membrane bilayers. Improvements in signal-to-noise ratios were observed with minimal distortion of the spectra when Maximum Entropy reconstruction was applied to non-linearly sampled data in the indirect dimension. Maximum Entropy reconstruction was also applied in the direct dimension by selecting sub-sets of data from the free induction decays. Because the noise is uncorrelated in the spectra obtained by Maximum Entropy reconstruction of data with different non-linear sampling schedules, it is possible to improve the signal-to-noise ratios by co-addition of multiple spectra derived from one experimental data set. The combined application of Maximum Entropy to data in the indirect and direct dimensions has the potential to lead to substantial reductions in the total amount of experimental time required for acquisition of data in multidimensional NMR experiments.

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Year:  2005        PMID: 16343957     DOI: 10.1016/j.jmr.2005.11.014

Source DB:  PubMed          Journal:  J Magn Reson        ISSN: 1090-7807            Impact factor:   2.229


  10 in total

1.  Enhanced sensitivity by nonuniform sampling enables multidimensional MAS NMR spectroscopy of protein assemblies.

Authors:  Sivakumar Paramasivam; Christopher L Suiter; Guangjin Hou; Shangjin Sun; Melissa Palmer; Jeffrey C Hoch; David Rovnyak; Tatyana Polenova
Journal:  J Phys Chem B       Date:  2012-06-18       Impact factor: 2.991

2.  A resonance assignment method for oriented-sample solid-state NMR of proteins.

Authors:  Robert W Knox; George J Lu; Stanley J Opella; Alexander A Nevzorov
Journal:  J Am Chem Soc       Date:  2010-06-23       Impact factor: 15.419

3.  Three-dimensional experiment for solid-state NMR of aligned protein samples in high field magnets.

Authors:  Alexander A Nevzorov; Sang Ho Park; Stanley J Opella
Journal:  J Biomol NMR       Date:  2007-01-10       Impact factor: 2.835

4.  Sensitivity gains, linearity, and spectral reproducibility in nonuniformly sampled multidimensional MAS NMR spectra of high dynamic range.

Authors:  Christopher L Suiter; Sivakumar Paramasivam; Guangjin Hou; Shangjin Sun; David Rice; Jeffrey C Hoch; David Rovnyak; Tatyana Polenova
Journal:  J Biomol NMR       Date:  2014-04-22       Impact factor: 2.835

5.  Towards automatic protein backbone assignment using proton-detected 4D solid-state NMR data.

Authors:  ShengQi Xiang; Veniamin Chevelkov; Stefan Becker; Adam Lange
Journal:  J Biomol NMR       Date:  2014-09-06       Impact factor: 2.835

6.  Deterministic schedules for robust and reproducible non-uniform sampling in multidimensional NMR.

Authors:  Matthew T Eddy; David Ruben; Robert G Griffin; Judith Herzfeld
Journal:  J Magn Reson       Date:  2011-12-10       Impact factor: 2.229

7.  Rapid three-dimensional MAS NMR spectroscopy at critical sensitivity.

Authors:  Yoh Matsuki; Matthew T Eddy; Robert G Griffin; Judith Herzfeld
Journal:  Angew Chem Int Ed Engl       Date:  2010-11-22       Impact factor: 15.336

8.  A time-saving strategy for MAS NMR spectroscopy by combining nonuniform sampling and paramagnetic relaxation assisted condensed data collection.

Authors:  Shangjin Sun; Si Yan; Changmiao Guo; Mingyue Li; Jeffrey C Hoch; John C Williams; Tatyana Polenova
Journal:  J Phys Chem B       Date:  2012-11-12       Impact factor: 2.991

9.  Gd3+-chelated lipid accelerates solid-state NMR spectroscopy of seven-transmembrane proteins.

Authors:  Chang Liu; Jing Liu; Xiaojun Xu; ShengQi Xiang; Shenlin Wang
Journal:  J Biomol NMR       Date:  2017-05-30       Impact factor: 2.835

10.  Sampling scheme and compressed sensing applied to solid-state NMR spectroscopy.

Authors:  Eugene C Lin; Stanley J Opella
Journal:  J Magn Reson       Date:  2013-10-01       Impact factor: 2.229

  10 in total

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