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Literature DB >> 16779043

Utilizing the UMLS for semantic mapping between terminologies.

Abstract

An algorithm was derived to find candidate mappings between any two terminologies inside the UMLS, making use of synonymy, explicit mapping relations and hierarchical relationships among UMLS concepts. Using an existing set of mappings from SNOMED CT to ICD9CM as our gold standard, we managed to find candidate mappings for 86% of SNOMED CT terms, with recall of 42% and precision of 20%. Among the various methods used, mapping by UMLS synonymy was particularly accurate and could potentially be useful as a quality assurance tool in the creation of mapping sets or in the UMLS editing process. Other strengths and weaknesses of the algorithm are discussed.

Entities: Disease

Mesh：

Year: 2005 PMID： 16779043 PMCID： PMC1560893

Source DB: PubMed Journal: AMIA Annu Symp Proc ISSN： 1559-4076

11 in total

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19 in total

1. Implementation of a platform dedicated to the biomedical analysis terminologies management.

Authors: Sylvie Cormont; Pierre-Yves Vandenbussche; Antoine Buemi; Jean Delahousse; Eric Lepage; Jean Charlet
Journal: AMIA Annu Symp Proc Date: 2011-10-22

2. Leveraging Lexical Matching and Ontological Alignment to Map SNOMED CT Surgical Procedures to ICD-10-PCS.

Authors: Kin Wah Fung; Julia Xu; Filip Ameye; Arturo Romero Gutiérrez; Arabella D'Havé
Journal: AMIA Annu Symp Proc Date: 2017-02-10

3. Combining lexical and semantic methods of inter-terminology mapping using the UMLS.

Authors: Kin Wah Fung; Olivier Bodenreider; Alan R Aronson; William T Hole; Suresh Srinivasan
Journal: Stud Health Technol Inform Date: 2007

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Authors: Rachel L Richesson; Jeffrey Krischer
Journal: J Am Med Inform Assoc Date: 2007-08-21 Impact factor: 4.497

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Authors: Paul Avillach; Michel Joubert; Marius Fieschi
Journal: AMIA Annu Symp Proc Date: 2007-10-11

6. LexGrid: a framework for representing, storing, and querying biomedical terminologies from simple to sublime.

Authors: Jyotishman Pathak; Harold R Solbrig; James D Buntrock; Thomas M Johnson; Christopher G Chute
Journal: J Am Med Inform Assoc Date: 2009-03-04 Impact factor: 4.497

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Authors: Michel Joubert; Hocine Abdoune; Tayeb Merabti; Stéfan Darmoni; Marius Fieschi
Journal: AMIA Annu Symp Proc Date: 2009-11-14

9. Synergism between the mapping projects from SNOMED CT to ICD-10 and ICD-10-CM.

Authors: Kin Wah Fung; Junchuan Xu
Journal: AMIA Annu Symp Proc Date: 2012-11-03

10. Implementation and management of a biomedical observation dictionary in a large healthcare information system.

Authors: Pierre-Yves Vandenbussche; Sylvie Cormont; Christophe André; Christel Daniel; Jean Delahousse; Jean Charlet; Eric Lepage
Journal: J Am Med Inform Assoc Date: 2013-05-01 Impact factor: 4.497