Literature DB >> 16366565

A stereoelectronic effect on turn formation due to proline substitution in elastin-mimetic polypeptides.

Wookhyun Kim1, R Andrew McMillan, James P Snyder, Vincent P Conticello.   

Abstract

Stereoelectronic effects have been identified as contributing factors to the conformational stability of collagen-mimetic peptide sequences. To assess the relevance of these factors within other protein structural contexts, three polypeptide sequences were prepared in which the sequences were derived from the canonical repeat unit (Val-Pro-Gly-Val-Gly) of the protein material elastin. These elastin-mimetic polypeptides, elastin-1, elastin-2, and elastin-3, incorporate (2S)-proline, (2S,4S)-4-fluoroproline, and (2S,4R)-4-fluoroproline, respectively, at the second position of the elastin repeat. Calorimetric and spectroscopic investigations of these three polypeptides indicate that the incorporation of the substituted proline residues had a dramatic effect upon the self-assembly of the corresponding elastin peptide. The presence of (2S,4R)-4-fluoroproline in elastin-3 lowered the temperature of the phase transition and increased the type II beta-turn population with respect to the parent polypeptide, while the presence of (2S,4S)-4-fluoroproline in elastin-2 had the opposite effect. These results suggest that stereoelectronic effects could either enhance or hinder the self-assembly of elastin-mimetic polypeptides, depending on the influence of the proline analogue on the energetics of the beta-turn conformation that develops within the pentapeptide structural repeats above the phase transition. Density functional theory (DFT) was employed to model three possible turn types (betaI-, betaII-, and inverse gamma-turns) derived from model peptide segments (MeCO-Xaa-Gly-NHMe) (Xaa = Pro, 4S-F-Pro, or 4R-F-Pro) corresponding to the turn-forming residues of the elastin repeat unit (Val-Pro-Gly-Val-Gly). The results of the these calculations suggested a similar outcome to the experimental data for the elastin-mimetic polypeptides, in that type II beta-turn structures were stabilized for peptide segments containing (2S,4R)-fluoroproline and destabilized for segments containing (2S,4S)-fluoroproline relative to the canonical proline residue.

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Year:  2005        PMID: 16366565     DOI: 10.1021/ja054105j

Source DB:  PubMed          Journal:  J Am Chem Soc        ISSN: 0002-7863            Impact factor:   15.419


  23 in total

1.  Elastomeric polypeptide-based biomaterials.

Authors:  Linqing Li; Manoj B Charati; Kristi L Kiick
Journal:  J Polym Sci A Polym Chem       Date:  2010-10       Impact factor: 2.702

2.  Reciprocity of steric and stereoelectronic effects in the collagen triple helix.

Authors:  Matthew D Shoulders; Jonathan A Hodges; Ronald T Raines
Journal:  J Am Chem Soc       Date:  2006-06-28       Impact factor: 15.419

Review 3.  Designing protein-based biomaterials for medical applications.

Authors:  Jennifer E Gagner; Wookhyun Kim; Elliot L Chaikof
Journal:  Acta Biomater       Date:  2013-10-09       Impact factor: 8.947

4.  Stereoelectronic and steric effects in side chains preorganize a protein main chain.

Authors:  Matthew D Shoulders; Kenneth A Satyshur; Katrina T Forest; Ronald T Raines
Journal:  Proc Natl Acad Sci U S A       Date:  2009-12-31       Impact factor: 11.205

5.  The aberrance of the 4S diastereomer of 4-hydroxyproline.

Authors:  Matthew D Shoulders; Frank W Kotch; Amit Choudhary; Ilia A Guzei; Ronald T Raines
Journal:  J Am Chem Soc       Date:  2010-08-11       Impact factor: 15.419

6.  4-Fluoroprolines: Conformational Analysis and Effects on the Stability and Folding of Peptides and Proteins.

Authors:  Robert W Newberry; Ronald T Raines
Journal:  Top Heterocycl Chem       Date:  2016-01-12

7.  Synthesis of 5-fluoro- and 5-hydroxymethanoprolines via lithiation of N-BOC-methanopyrrolidines. Constrained Cγ-exo and Cγ-endo Flp and Hyp conformer mimics.

Authors:  Grant R Krow; Matthew D Shoulders; Ramakrishna Edupuganti; Deepa Gandla; Fang Yu; Philip E Sonnet; Matthew Sender; Amit Choudhary; Charles DeBrosse; Charles W Ross; Patrick Carroll; Ronald T Raines
Journal:  J Org Chem       Date:  2012-05-25       Impact factor: 4.354

8.  Multiple site-selective insertions of noncanonical amino acids into sequence-repetitive polypeptides.

Authors:  I-Lin Wu; Melissa A Patterson; Holly E Carpenter Desai; Ryan A Mehl; Gianluca Giorgi; Vincent P Conticello
Journal:  Chembiochem       Date:  2013-04-26       Impact factor: 3.164

9.  Engineering the Architecture of Elastin-Like Polypeptides: From Unimers to Hierarchical Self-Assembly.

Authors:  Soumen Saha; Samagya Banskota; Stefan Roberts; Nadia Kirmani; Ashutosh Chilkoti
Journal:  Adv Ther (Weinh)       Date:  2020-02-03

10.  Conformational preferences of substrates for human prolyl 4-hydroxylase.

Authors:  Kelly L Gorres; Ram Edupuganti; Grant R Krow; Ronald T Raines
Journal:  Biochemistry       Date:  2008-08-15       Impact factor: 3.162

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