Literature DB >> 16787056

Reciprocity of steric and stereoelectronic effects in the collagen triple helix.

Matthew D Shoulders1, Jonathan A Hodges, Ronald T Raines.   

Abstract

In previous work, we demonstrated that 4-fluoroproline residues can contribute greatly to the conformational stability of the collagen triple helix, and that this stability arises from stereoelectronic effects that fix the pucker of the pyrrolidine ring and thereby preorganize the backbone properly for triple-helix formation. Here, we take a reciprocal approach, demonstrating that the steric effect of a 4-methyl group confers stability similar to that from a 4-fluoro group in the opposite configuration. Such fundamental interplay between steric and stereoelectronic effects is heretofore unknown in proteins-natural or synthetic-and provides a new means to modulate conformational stability.

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Year:  2006        PMID: 16787056      PMCID: PMC2517127          DOI: 10.1021/ja061793d

Source DB:  PubMed          Journal:  J Am Chem Soc        ISSN: 0002-7863            Impact factor:   15.419


  24 in total

1.  Structural bases of collagen stabilization induced by proline hydroxylation.

Authors:  L Vitagliano; R Berisio; L Mazzarella; A Zagari
Journal:  Biopolymers       Date:  2001-04-15       Impact factor: 2.505

Review 2.  Insights on the conformational stability of collagen.

Authors:  Cara L Jenkins; Ronald T Raines
Journal:  Nat Prod Rep       Date:  2002-02       Impact factor: 13.423

3.  An electronic effect on protein structure.

Authors:  Matthew P Hinderaker; Ronald T Raines
Journal:  Protein Sci       Date:  2003-06       Impact factor: 6.725

4.  2005 Emil Thomas Kaiser Award.

Authors:  Ronald T Raines
Journal:  Protein Sci       Date:  2006-05       Impact factor: 6.725

5.  Crystal and molecular structure of a collagen-like peptide at 1.9 A resolution.

Authors:  J Bella; M Eaton; B Brodsky; H M Berman
Journal:  Science       Date:  1994-10-07       Impact factor: 47.728

6.  Collagen stability: insights from NMR spectroscopic and hybrid density functional computational investigations of the effect of electronegative substituents on prolyl ring conformations.

Authors:  Michele L DeRider; Steven J Wilkens; Michael J Waddell; Lynn E Bretscher; Frank Weinhold; Ronald T Raines; John L Markley
Journal:  J Am Chem Soc       Date:  2002-03-20       Impact factor: 15.419

7.  Asymmetric hydrogenations for the synthesis of Boc-protected 4-alkylprolinols and prolines.

Authors:  Juan R Del Valle; Murray Goodman
Journal:  J Org Chem       Date:  2003-05-16       Impact factor: 4.354

8.  Characterization of collagen model peptides containing 4-fluoroproline; (4(S)-fluoroproline-pro-gly)10 forms a triple helix, but (4(R)-fluoroproline-pro-gly)10 does not.

Authors:  Masamitsu Doi; Yoshinori Nishi; Susumu Uchiyama; Yuji Nishiuchi; Takashi Nakazawa; Tadayasu Ohkubo; Yuji Kobayashi
Journal:  J Am Chem Soc       Date:  2003-08-20       Impact factor: 15.419

9.  Stereoelectronic effects on collagen stability: the dichotomy of 4-fluoroproline diastereomers.

Authors:  Jonathan A Hodges; Ronald T Raines
Journal:  J Am Chem Soc       Date:  2003-08-06       Impact factor: 15.419

10.  Hydroxylation-induced stabilization of the collagen triple helix. Acetyl-(glycyl-4(R)-hydroxyprolyl-4(R)-hydroxyprolyl)(10)-NH(2) forms a highly stable triple helix.

Authors:  Kazunori Mizuno; Toshihiko Hayashi; David H Peyton; Hans Peter Bächinger
Journal:  J Biol Chem       Date:  2004-07-01       Impact factor: 5.157

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  30 in total

1.  Mutations in PPIB (cyclophilin B) delay type I procollagen chain association and result in perinatal lethal to moderate osteogenesis imperfecta phenotypes.

Authors:  Shawna M Pyott; Ulrike Schwarze; Helena E Christiansen; Melanie G Pepin; Dru F Leistritz; Richard Dineen; Catharine Harris; Barbara K Burton; Brad Angle; Katherine Kim; Michael D Sussman; Maryann Weis; David R Eyre; David W Russell; Kevin J McCarthy; Robert D Steiner; Peter H Byers
Journal:  Hum Mol Genet       Date:  2011-01-31       Impact factor: 6.150

2.  Stabilization of collagen-model, triple-helical peptides for in vitro and in vivo applications.

Authors:  Manishabrata Bhowmick; Gregg B Fields
Journal:  Methods Mol Biol       Date:  2013

3.  Stereoelectronic and steric effects in side chains preorganize a protein main chain.

Authors:  Matthew D Shoulders; Kenneth A Satyshur; Katrina T Forest; Ronald T Raines
Journal:  Proc Natl Acad Sci U S A       Date:  2009-12-31       Impact factor: 11.205

4.  Interstrand dipole-dipole interactions can stabilize the collagen triple helix.

Authors:  Matthew D Shoulders; Ronald T Raines
Journal:  J Biol Chem       Date:  2011-04-10       Impact factor: 5.157

5.  Synthesis of 5-fluoro- and 5-hydroxymethanoprolines via lithiation of N-BOC-methanopyrrolidines. Constrained Cγ-exo and Cγ-endo Flp and Hyp conformer mimics.

Authors:  Grant R Krow; Matthew D Shoulders; Ramakrishna Edupuganti; Deepa Gandla; Fang Yu; Philip E Sonnet; Matthew Sender; Amit Choudhary; Charles DeBrosse; Charles W Ross; Patrick Carroll; Ronald T Raines
Journal:  J Org Chem       Date:  2012-05-25       Impact factor: 4.354

6.  Thioamides in the collagen triple helix.

Authors:  Robert W Newberry; Brett VanVeller; Ronald T Raines
Journal:  Chem Commun (Camb)       Date:  2015-06-14       Impact factor: 6.222

7.  Optimization of interstrand interactions enables burn detection with a collagen-mimetic peptide.

Authors:  Jesús M Dones; I Caglar Tanrikulu; Jenu V Chacko; Alexandra B Schroeder; Trish T Hoang; Angela L F Gibson; Kevin W Eliceiri; Ronald T Raines
Journal:  Org Biomol Chem       Date:  2019-11-27       Impact factor: 3.876

8.  Stronger and (now) longer synthetic collagen.

Authors:  Ronald T Raines
Journal:  Adv Exp Med Biol       Date:  2009       Impact factor: 2.622

9.  Origin of the stability conferred upon collagen by fluorination.

Authors:  Matthew D Shoulders; Kimberli J Kamer; Ronald T Raines
Journal:  Bioorg Med Chem Lett       Date:  2009-04-21       Impact factor: 2.823

10.  Proline editing: a general and practical approach to the synthesis of functionally and structurally diverse peptides. Analysis of steric versus stereoelectronic effects of 4-substituted prolines on conformation within peptides.

Authors:  Anil K Pandey; Devan Naduthambi; Krista M Thomas; Neal J Zondlo
Journal:  J Am Chem Soc       Date:  2013-03-11       Impact factor: 15.419

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