Literature DB >> 16314580

Counting human somatic cell replications: methylation mirrors endometrial stem cell divisions.

Jung Yeon Kim1, Simon Tavaré, Darryl Shibata.   

Abstract

Cell proliferation may be altered in many diseases, but it is uncertain exactly how to measure total numbers of divisions. Although it is impossible to count every division directly, potentially total numbers of stem cell divisions since birth may be inferred from numbers of somatic errors. The idea is that divisions are surreptitiously recorded by random errors that occur during replication. To test this "molecular clock" hypothesis, epigenetic errors encoded in certain methylation patterns were counted in glands from 30 uteri. Endometrial divisions can differ among women because of differences in estrogen exposures or numbers of menstrual cycles. Consistent with an association between mitotic age and methylation, there was an age-related increase in methylation with stable levels after menopause, and significantly less methylation was observed in lean or older multiparous women. Methylation patterns were diverse and more consistent with niche rather than immortal stem cell lineages. There was no evidence for decreased stem cell survival with aging. An ability to count lifetime numbers of stem cell divisions covertly recorded by random replication errors provides new opportunities to link cell proliferation with aging and cancer.

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Year:  2005        PMID: 16314580      PMCID: PMC1308885          DOI: 10.1073/pnas.0503976102

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  17 in total

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Authors:  Adrian Bird
Journal:  Genes Dev       Date:  2002-01-01       Impact factor: 11.361

Review 3.  Biology of hematopoietic stem cells and progenitors: implications for clinical application.

Authors:  Motonari Kondo; Amy J Wagers; Markus G Manz; Susan S Prohaska; David C Scherer; Georg F Beilhack; Judith A Shizuru; Irving L Weissman
Journal:  Annu Rev Immunol       Date:  2002-12-17       Impact factor: 28.527

Review 4.  The modern molecular clock.

Authors:  Lindell Bromham; David Penny
Journal:  Nat Rev Genet       Date:  2003-03       Impact factor: 53.242

5.  Evidence of the monoclonal composition of human endometrial epithelial glands and mosaic pattern of clonal distribution in luminal epithelium.

Authors:  Masaaki Tanaka; Satoru Kyo; Taro Kanaya; Noriyuki Yatabe; Mitsuhiro Nakamura; Yoshiko Maida; Masaru Okabe; Masaki Inoue
Journal:  Am J Pathol       Date:  2003-07       Impact factor: 4.307

6.  Cancer statistics, 2005.

Authors:  Ahmedin Jemal; Taylor Murray; Elizabeth Ward; Alicia Samuels; Ram C Tiwari; Asma Ghafoor; Eric J Feuer; Michael J Thun
Journal:  CA Cancer J Clin       Date:  2005 Jan-Feb       Impact factor: 508.702

7.  Stem cells in gynaecology.

Authors:  Caroline E Gargett
Journal:  Aust N Z J Obstet Gynaecol       Date:  2004-10       Impact factor: 2.100

Review 8.  Prevention of cancers of the breast, endometrium and ovary.

Authors:  Malcolm C Pike; Celeste Leigh Pearce; Anna H Wu
Journal:  Oncogene       Date:  2004-08-23       Impact factor: 9.867

9.  Clonogenicity of human endometrial epithelial and stromal cells.

Authors:  Rachel W S Chan; Kjiana E Schwab; Caroline E Gargett
Journal:  Biol Reprod       Date:  2004-02-06       Impact factor: 4.285

Review 10.  Stem cells find their niche.

Authors:  A Spradling; D Drummond-Barbosa; T Kai
Journal:  Nature       Date:  2001-11-01       Impact factor: 49.962

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  39 in total

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Journal:  Dig Dis Sci       Date:  2010-07-16       Impact factor: 3.199

2.  Phylogenetic fate mapping: theoretical and experimental studies applied to the development of mouse fibroblasts.

Authors:  Stephen J Salipante; James M Thompson; Marshall S Horwitz
Journal:  Genetics       Date:  2008-02-03       Impact factor: 4.562

Review 3.  Aging by epigenetics--a consequence of chromatin damage?

Authors:  John M Sedivy; Gowrishankar Banumathy; Peter D Adams
Journal:  Exp Cell Res       Date:  2008-03-12       Impact factor: 3.905

Review 4.  Novel therapies targeting endometriosis.

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5.  Epigenetic Basis for the Differentiation Potential of Mesenchymal and Embryonic Stem Cells.

Authors:  Philippe Collas; Agate Noer; Anita L Sørensen
Journal:  Transfus Med Hemother       Date:  2008-05-08       Impact factor: 3.747

Review 6.  Epigenome-based cancer risk prediction: rationale, opportunities and challenges.

Authors:  Martin Widschwendter; Allison Jones; Iona Evans; Daniel Reisel; Joakim Dillner; Karin Sundström; Ewout W Steyerberg; Yvonne Vergouwe; Odette Wegwarth; Felix G Rebitschek; Uwe Siebert; Gaby Sroczynski; Inez D de Beaufort; Ineke Bolt; David Cibula; Michal Zikan; Line Bjørge; Nicoletta Colombo; Nadia Harbeck; Frank Dudbridge; Anne-Marie Tasse; Bartha M Knoppers; Yann Joly; Andrew E Teschendorff; Nora Pashayan
Journal:  Nat Rev Clin Oncol       Date:  2018-02-27       Impact factor: 66.675

7.  Microphysiological Modeling of the Human Endometrium.

Authors:  Hannes Campo; Alina Murphy; Sule Yildiz; Teresa Woodruff; Irene Cervelló; J Julie Kim
Journal:  Tissue Eng Part A       Date:  2020-04-28       Impact factor: 3.845

Review 8.  Stem cell chronicles: autobiographies within genomes.

Authors:  Darryl Shibata; Simon Tavaré
Journal:  Stem Cell Rev       Date:  2007-01       Impact factor: 5.739

9.  Systemic Age-Associated DNA Hypermethylation of ELOVL2 Gene: In Vivo and In Vitro Evidences of a Cell Replication Process.

Authors:  Maria Giulia Bacalini; Joris Deelen; Chiara Pirazzini; Marco De Cecco; Cristina Giuliani; Catia Lanzarini; Francesco Ravaioli; Elena Marasco; Diana van Heemst; H Eka D Suchiman; Roderick Slieker; Enrico Giampieri; Rina Recchioni; Fiorella Marcheselli; Stefano Salvioli; Giovanni Vitale; Fabiola Olivieri; Annemieke M W Spijkerman; Martijn E T Dollé; John M Sedivy; Gastone Castellani; Claudio Franceschi; Pieternella E Slagboom; Paolo Garagnani
Journal:  J Gerontol A Biol Sci Med Sci       Date:  2017-08-01       Impact factor: 6.053

10.  Intra-tumor heterogeneity of MLH1 promoter methylation revealed by deep single molecule bisulfite sequencing.

Authors:  Katherine E Varley; David G Mutch; Tina B Edmonston; Paul J Goodfellow; Robi D Mitra
Journal:  Nucleic Acids Res       Date:  2009-06-03       Impact factor: 16.971

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