Literature DB >> 27672102

Systemic Age-Associated DNA Hypermethylation of ELOVL2 Gene: In Vivo and In Vitro Evidences of a Cell Replication Process.

Maria Giulia Bacalini1,2,3, Joris Deelen4,5, Chiara Pirazzini1,2, Marco De Cecco6, Cristina Giuliani7, Catia Lanzarini1,2, Francesco Ravaioli1, Elena Marasco1, Diana van Heemst4, H Eka D Suchiman4, Roderick Slieker4, Enrico Giampieri8, Rina Recchioni9, Fiorella Marcheselli9, Stefano Salvioli1,2, Giovanni Vitale10,11, Fabiola Olivieri9,12, Annemieke M W Spijkerman13, Martijn E T Dollé14, John M Sedivy6, Gastone Castellani8, Claudio Franceschi1,12,15, Pieternella E Slagboom4, Paolo Garagnani1,2.   

Abstract

Epigenetic remodeling is one of the major features of the aging process. We recently demonstrated that DNA methylation of ELOVL2 and FHL2 CpG islands is highly correlated with age in whole blood. Here we investigated several aspects of age-associated hypermethylation of ELOVL2 and FHL2. We showed that ELOVL2 methylation is significantly different in primary dermal fibroblast cultures from donors of different ages. Using epigenomic data from public resources, we demonstrated that most of the tissues show ELOVL2 and FHL2 hypermethylation with age. Interestingly, ELOVL2 hypermethylation was not found in tissues with very low replication rate. We demonstrated that ELOVL2 hypermethylation is associated with in vitro cell replication rather than with senescence. We confirmed intra-individual hypermethylation of ELOVL2 and FHL2 in longitudinally assessed participants from the Doetinchem Cohort Study. Finally we showed that, although the methylation of the two loci is not associated with longevity/mortality in the Leiden Longevity Study, ELOVL2 methylation is associated with cytomegalovirus status in nonagenarians, which could be informative of a higher number of replication events in a fraction of whole-blood cells. Collectively, these results indicate that ELOVL2 methylation is a marker of cell divisions occurring during human aging.
© The Author 2016. Published by Oxford University Press on behalf of The Gerontological Society of America. All rights reserved. For permissions, please e-mail: journals.permissions@oup.com.

Entities:  

Keywords:  Biomarker; Epigenetics; FHL2; Methylation

Mesh:

Substances:

Year:  2017        PMID: 27672102      PMCID: PMC5861890          DOI: 10.1093/gerona/glw185

Source DB:  PubMed          Journal:  J Gerontol A Biol Sci Med Sci        ISSN: 1079-5006            Impact factor:   6.053


  55 in total

1.  Identification of genetic elements that autonomously determine DNA methylation states.

Authors:  Florian Lienert; Christiane Wirbelauer; Indrani Som; Ann Dean; Fabio Mohn; Dirk Schübeler
Journal:  Nat Genet       Date:  2011-10-02       Impact factor: 38.330

2.  Methylation of ELOVL2 gene as a new epigenetic marker of age.

Authors:  Paolo Garagnani; Maria G Bacalini; Chiara Pirazzini; Davide Gori; Cristina Giuliani; Daniela Mari; Anna M Di Blasio; Davide Gentilini; Giovanni Vitale; Sebastiano Collino; Serge Rezzi; Gastone Castellani; Miriam Capri; Stefano Salvioli; Claudio Franceschi
Journal:  Aging Cell       Date:  2012-10-14       Impact factor: 9.304

Review 3.  Human immunosenescence: the prevailing of innate immunity, the failing of clonotypic immunity, and the filling of immunological space.

Authors:  C Franceschi; M Bonafè; S Valensin
Journal:  Vaccine       Date:  2000-02-25       Impact factor: 3.641

4.  Measurement in vivo of proliferation rates of slow turnover cells by 2H2O labeling of the deoxyribose moiety of DNA.

Authors:  R A Neese; L M Misell; S Turner; A Chu; J Kim; D Cesar; R Hoh; F Antelo; A Strawford; J M McCune; M Christiansen; M K Hellerstein
Journal:  Proc Natl Acad Sci U S A       Date:  2002-11-07       Impact factor: 11.205

5.  Epigenetic polymorphism and the stochastic formation of differentially methylated regions in normal and cancerous tissues.

Authors:  Gilad Landan; Netta Mendelson Cohen; Zohar Mukamel; Amir Bar; Alina Molchadsky; Ran Brosh; Shirley Horn-Saban; Daniela Amann Zalcenstein; Naomi Goldfinger; Adi Zundelevich; Einav Nili Gal-Yam; Varda Rotter; Amos Tanay
Journal:  Nat Genet       Date:  2012-10-14       Impact factor: 38.330

6.  Equal numbers of neuronal and nonneuronal cells make the human brain an isometrically scaled-up primate brain.

Authors:  Frederico A C Azevedo; Ludmila R B Carvalho; Lea T Grinberg; José Marcelo Farfel; Renata E L Ferretti; Renata E P Leite; Wilson Jacob Filho; Roberto Lent; Suzana Herculano-Houzel
Journal:  J Comp Neurol       Date:  2009-04-10       Impact factor: 3.215

7.  Genome-wide methylation profiles reveal quantitative views of human aging rates.

Authors:  Gregory Hannum; Justin Guinney; Ling Zhao; Li Zhang; Guy Hughes; SriniVas Sadda; Brandy Klotzle; Marina Bibikova; Jian-Bing Fan; Yuan Gao; Rob Deconde; Menzies Chen; Indika Rajapakse; Stephen Friend; Trey Ideker; Kang Zhang
Journal:  Mol Cell       Date:  2012-11-21       Impact factor: 17.970

8.  Epigenetic predictor of age.

Authors:  Sven Bocklandt; Wen Lin; Mary E Sehl; Francisco J Sánchez; Janet S Sinsheimer; Steve Horvath; Eric Vilain
Journal:  PLoS One       Date:  2011-06-22       Impact factor: 3.240

9.  The epigenetic clock is correlated with physical and cognitive fitness in the Lothian Birth Cohort 1936.

Authors:  Riccardo E Marioni; Sonia Shah; Allan F McRae; Stuart J Ritchie; Graciela Muniz-Terrera; Sarah E Harris; Jude Gibson; Paul Redmond; Simon R Cox; Alison Pattie; Janie Corley; Adele Taylor; Lee Murphy; John M Starr; Steve Horvath; Peter M Visscher; Naomi R Wray; Ian J Deary
Journal:  Int J Epidemiol       Date:  2015-01-22       Impact factor: 7.196

10.  Dynamics of Dnmt1 interaction with the replication machinery and its role in postreplicative maintenance of DNA methylation.

Authors:  Lothar Schermelleh; Andrea Haemmer; Fabio Spada; Nicole Rösing; Daniela Meilinger; Ulrich Rothbauer; M Cristina Cardoso; Heinrich Leonhardt
Journal:  Nucleic Acids Res       Date:  2007-06-18       Impact factor: 16.971

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  29 in total

1.  Genomic stability, anti-inflammatory phenotype, and up-regulation of the RNAseH2 in cells from centenarians.

Authors:  Gianluca Storci; Sabrina De Carolis; Alessio Papi; Maria Giulia Bacalini; Noémie Gensous; Elena Marasco; Anna Tesei; Francesco Fabbri; Chiara Arienti; Michele Zanoni; Anna Sarnelli; Spartaco Santi; Fabiola Olivieri; Emanuela Mensà; Silvia Latini; Manuela Ferracin; Stefano Salvioli; Paolo Garagnani; Claudio Franceschi; Massimiliano Bonafè
Journal:  Cell Death Differ       Date:  2019-01-08       Impact factor: 15.828

2.  Human aging DNA methylation signatures are conserved but accelerated in cultured fibroblasts.

Authors:  Gabriel Sturm; Andres Cardenas; Marie-Abèle Bind; Steve Horvath; Shuang Wang; Yunzhang Wang; Sara Hägg; Michio Hirano; Martin Picard
Journal:  Epigenetics       Date:  2019-06-12       Impact factor: 4.528

Review 3.  Circulating miRNAs and miRNA shuttles as biomarkers: Perspective trajectories of healthy and unhealthy aging.

Authors:  Fabiola Olivieri; Miriam Capri; Massimiliano Bonafè; Cristina Morsiani; Hwa Jin Jung; Liana Spazzafumo; Jose Viña; Yousin Suh
Journal:  Mech Ageing Dev       Date:  2016-12-13       Impact factor: 5.432

4.  A longitudinal, epigenome-wide study of DNA methylation in anorexia nervosa: results in actively ill, partially weight-restored, long-term remitted and non-eating-disordered women

Authors:  Howard Steiger; Linda Booij; `Esther Kahan; Kevin McGregor; Lea Thaler; Emilie Fletcher; Aurelie Labbe; Ridha Joober; Mimi Israël; Moshe Szyf; Luis B. Agellon; Lise Gauvin; Annie St-Hilaire; Erika Rossi
Journal:  J Psychiatry Neurosci       Date:  2019-05-01       Impact factor: 6.186

5.  Blood DNA Methylation and Aging: A Cross-Sectional Analysis and Longitudinal Validation in the InCHIANTI Study.

Authors:  Ravi Tharakan; Ceereena Ubaida-Mohien; Ann Zenobia Moore; Dena Hernandez; Toshiko Tanaka; Luigi Ferrucci
Journal:  J Gerontol A Biol Sci Med Sci       Date:  2020-10-15       Impact factor: 6.053

6.  ADIPOR1 deficiency-induced suppression of retinal ELOVL2 and docosahexaenoic acid levels during photoreceptor degeneration and visual loss.

Authors:  Hideto Osada; Eriko Toda; Kohei Homma; Naymel A Guzman; Norihiro Nagai; Mamoru Ogawa; Kazuno Negishi; Makoto Arita; Kazuo Tsubota; Yoko Ozawa
Journal:  Cell Death Dis       Date:  2021-05-07       Impact factor: 8.469

7.  Acceleration of leukocytes' epigenetic age as an early tumor and sex-specific marker of breast and colorectal cancer.

Authors:  Danielle Fernandes Durso; Maria Giulia Bacalini; Claudia Sala; Chiara Pirazzini; Elena Marasco; Massimiliano Bonafé; Ítalo Faria do Valle; Davide Gentilini; Gastone Castellani; Ana Maria Caetano Faria; Claudio Franceschi; Paolo Garagnani; Christine Nardini
Journal:  Oncotarget       Date:  2017-04-04

Review 8.  The use of DNA methylation clock in aging research.

Authors:  Xi He; Jiaojiao Liu; Bo Liu; Jingshan Shi
Journal:  Exp Biol Med (Maywood)       Date:  2020-11-11

9.  Are the Healthy Vulnerable? Cytomegalovirus Seropositivity in Healthy Adults Is Associated With Accelerated Epigenetic Age and Immune Dysregulation.

Authors:  Chad Poloni; Moshe Szyf; David Cheishvili; Christos M Tsoukas
Journal:  J Infect Dis       Date:  2022-02-01       Impact factor: 5.226

10.  Methylation of the genes ROD1, NLRC5, and HKR1 is associated with aging in Hainan centenarians.

Authors:  Qian Zeng; Xiaoping Chen; Chaoxue Ning; Qiao Zhu; Yao Yao; Yali Zhao; Fuxin Luan
Journal:  BMC Med Genomics       Date:  2018-02-02       Impact factor: 3.063

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