Literature DB >> 15213435

1H,13C-1H,1H dipolar cross-correlated spin relaxation in methyl groups.

Vitali Tugarinov1, Lewis E Kay.   

Abstract

Relaxation in methyl groups is strongly influenced by cross-correlated interactions involving the methyl dipoles. One of the major interference effects results from intra-methyl (1)H-(13)C, (1)H-(1)H dipolar interactions, leading to significant differences in the relaxation of certain multiplet components that contribute to double- and zero-quantum (1)H-(13)C spectra. NMR experiments are presented for the measurement of this differential relaxation effect. It is shown that this difference in relaxation between double- and zero-quantum multiplet components can be used as a sensitive reporter of side chain dynamics and that accurate methyl axis order parameters can be measured in proteins that tumble with correlation times greater than approximately 5 ns.

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Year:  2004        PMID: 15213435     DOI: 10.1023/B:JNMR.0000032562.07475.7f

Source DB:  PubMed          Journal:  J Biomol NMR        ISSN: 0925-2738            Impact factor:   2.835


  12 in total

1.  Four-dimensional NMR spectroscopy of a 723-residue protein: chemical shift assignments and secondary structure of malate synthase g.

Authors:  Vitali Tugarinov; Ranjith Muhandiram; Ayeda Ayed; Lewis E Kay
Journal:  J Am Chem Soc       Date:  2002-08-28       Impact factor: 15.419

2.  An isotope labeling strategy for methyl TROSY spectroscopy.

Authors:  Vitali Tugarinov; Lewis E Kay
Journal:  J Biomol NMR       Date:  2004-02       Impact factor: 2.835

3.  Chi1 torsion angle dynamics in proteins from dipolar couplings.

Authors:  A Mittermaier; L E Kay
Journal:  J Am Chem Soc       Date:  2001-07-18       Impact factor: 15.419

4.  Deuterium spin probes of side-chain dynamics in proteins. 1. Measurement of five relaxation rates per deuteron in (13)C-labeled and fractionally (2)H-enriched proteins in solution.

Authors:  Oscar Millet; D R Muhandiram; Nikolai R Skrynnikov; Lewis E Kay
Journal:  J Am Chem Soc       Date:  2002-06-05       Impact factor: 15.419

5.  Deuterium spin probes of side-chain dynamics in proteins. 2. Spectral density mapping and identification of nanosecond time-scale side-chain motions.

Authors:  Nikolai R Skrynnikov; Oscar Millet; Lewis E Kay
Journal:  J Am Chem Soc       Date:  2002-06-05       Impact factor: 15.419

6.  NMRPipe: a multidimensional spectral processing system based on UNIX pipes.

Authors:  F Delaglio; S Grzesiek; G W Vuister; G Zhu; J Pfeifer; A Bax
Journal:  J Biomol NMR       Date:  1995-11       Impact factor: 2.835

7.  A novel experiment for the quantitative measurement of CSA(1H(N))/CSA(15N) cross-correlated relaxation in 15N-labeled proteins.

Authors:  M Tessari; G W Vuister
Journal:  J Biomol NMR       Date:  2000-02       Impact factor: 2.835

8.  Kinetics of folding of the IgG binding domain of peptostreptococcal protein L.

Authors:  M L Scalley; Q Yi; H Gu; A McCormack; J R Yates; D Baker
Journal:  Biochemistry       Date:  1997-03-18       Impact factor: 3.162

9.  Line narrowing in methyl-TROSY using zero-quantum 1H-13C NMR spectroscopy.

Authors:  Vitali Tugarinov; Remco Sprangers; Lewis E Kay
Journal:  J Am Chem Soc       Date:  2004-04-21       Impact factor: 15.419

10.  Cross-correlated relaxation enhanced 1H[bond]13C NMR spectroscopy of methyl groups in very high molecular weight proteins and protein complexes.

Authors:  Vitali Tugarinov; Peter M Hwang; Jason E Ollerenshaw; Lewis E Kay
Journal:  J Am Chem Soc       Date:  2003-08-27       Impact factor: 15.419

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  19 in total

1.  Estimating side-chain order in methyl-protonated, perdeuterated proteins via multiple-quantum relaxation violated coherence transfer NMR spectroscopy.

Authors:  Hechao Sun; Raquel Godoy-Ruiz; Vitali Tugarinov
Journal:  J Biomol NMR       Date:  2012-03       Impact factor: 2.835

Review 2.  Structural dynamics of bio-macromolecules by NMR: the slowly relaxing local structure approach.

Authors:  Eva Meirovitch; Yury E Shapiro; Antonino Polimeno; Jack H Freed
Journal:  Prog Nucl Magn Reson Spectrosc       Date:  2010-05       Impact factor: 9.795

Review 3.  Characterization of the fast dynamics of protein amino acid side chains using NMR relaxation in solution.

Authors:  Tatyana I Igumenova; Kendra King Frederick; A Joshua Wand
Journal:  Chem Rev       Date:  2006-05       Impact factor: 60.622

4.  An improved picture of methyl dynamics in proteins from slowly relaxing local structure analysis of 2H spin relaxation.

Authors:  Eva Meirovitch; Yury E Shapiro; Antonino Polimeno; Jack H Freed
Journal:  J Phys Chem B       Date:  2007-10-17       Impact factor: 2.991

5.  Quantitative gamma-HCNCH: determination of the glycosidic torsion angle chi in RNA oligonucleotides from the analysis of CH dipolar cross-correlated relaxation by solution NMR spectroscopy.

Authors:  Jörg Rinnenthal; Christian Richter; Jan Ferner; Elke Duchardt; Harald Schwalbe
Journal:  J Biomol NMR       Date:  2007-07-20       Impact factor: 2.835

6.  Functional Role of Solvent Entropy and Conformational Entropy of Metal Binding in a Dynamically Driven Allosteric System.

Authors:  Daiana A Capdevila; Katherine A Edmonds; Gregory C Campanello; Hongwei Wu; Giovanni Gonzalez-Gutierrez; David P Giedroc
Journal:  J Am Chem Soc       Date:  2018-07-16       Impact factor: 15.419

7.  Highly efficient residue-selective labeling with isotope-labeled Ile, Leu, and Val using a new auxotrophic E. coli strain.

Authors:  Yohei Miyanoiri; Yojiro Ishida; Mitsuhiro Takeda; Tsutomu Terauchi; Masayori Inouye; Masatsune Kainosho
Journal:  J Biomol NMR       Date:  2016-06-06       Impact factor: 2.835

8.  Entropy redistribution controls allostery in a metalloregulatory protein.

Authors:  Daiana A Capdevila; Joseph J Braymer; Katherine A Edmonds; Hongwei Wu; David P Giedroc
Journal:  Proc Natl Acad Sci U S A       Date:  2017-03-27       Impact factor: 11.205

9.  Protein dynamics in the solid-state from 2H NMR lineshape analysis. III. MOMD in the presence of Magic Angle Spinning.

Authors:  Eva Meirovitch; Zhichun Liang; Jack H Freed
Journal:  Solid State Nucl Magn Reson       Date:  2017-11-21       Impact factor: 2.293

10.  Multiplet-filtered and gradient-selected zero-quantum TROSY experiments for 13C1H3 methyl groups in proteins.

Authors:  Michelle L Gill; Arthur G Palmer
Journal:  J Biomol NMR       Date:  2011-09-15       Impact factor: 2.835

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