Literature DB >> 1510916

Kinetic analysis of folding and unfolding the 56 amino acid IgG-binding domain of streptococcal protein G.

P Alexander1, J Orban, P Bryan.   

Abstract

The 56 amino acid B domain of protein G (GB) is a stable globular folding unit with no disulfide cross-links. The physical properties of GB offer extraordinary flexibility for evaluating the energetics of the folding reaction. The protein is monomeric and very soluble in both folded and unfolded forms. The folding reaction has been previously examined by differential scanning calorimetry (Alexander et al., 1992) and found to exhibit two-state unfolding behavior over a wide pH range with an unfolding transition near 90 degrees C (GB1) at neutral pH. Here, the kinetics of folding and unfolding two naturally occurring versions of GB have been measured using stopped-flow mixing methods and analyzed according to transition-state theory. GB contains no prolines, and the kinetics of folding and unfolding can be fit to a single, first-order rate constant over the temperature range of 5-35 degrees C. The major thermodynamic changes going from the unfolded state to the transition state are (1) a large decrease in heat capacity (delta Cp), indicating that the transition state is compact and solvent inaccessible relative to the unfolded state; (2) a large loss of entropy; and (3) a small increase in enthalpy. The most surprising feature of the folding of GB compared to that of previously studied proteins is that its folding approximates a rapid diffusion controlled process with little increase in enthalpy going from the unfolded to the transition state.

Entities:  

Mesh:

Substances:

Year:  1992        PMID: 1510916     DOI: 10.1021/bi00147a006

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  42 in total

1.  The speed limit for protein folding measured by triplet-triplet energy transfer.

Authors:  O Bieri; J Wirz; B Hellrung; M Schutkowski; M Drewello; T Kiefhaber
Journal:  Proc Natl Acad Sci U S A       Date:  1999-08-17       Impact factor: 11.205

2.  A systematic exploration of the influence of the protein stability on amyloid fibril formation in vitro.

Authors:  M Ramirez-Alvarado; J S Merkel; L Regan
Journal:  Proc Natl Acad Sci U S A       Date:  2000-08-01       Impact factor: 11.205

3.  Mutations in the B1 domain of protein G that delay the onset of amyloid fibril formation in vitro.

Authors:  Marina Ramírez-Alvarado; Melanie J Cocco; Lynne Regan
Journal:  Protein Sci       Date:  2003-03       Impact factor: 6.725

4.  The ensemble folding kinetics of protein G from an all-atom Monte Carlo simulation.

Authors:  Jun Shimada; Eugene I Shakhnovich
Journal:  Proc Natl Acad Sci U S A       Date:  2002-08-06       Impact factor: 11.205

5.  The origins of asymmetry in the folding transition states of protein L and protein G.

Authors:  John Karanicolas; Charles L Brooks
Journal:  Protein Sci       Date:  2002-10       Impact factor: 6.725

6.  GB1 is not a two-state folder: identification and characterization of an on-pathway intermediate.

Authors:  Angela Morrone; Rajanish Giri; Rudesh D Toofanny; Carlo Travaglini-Allocatelli; Maurizio Brunori; Valerie Daggett; Stefano Gianni
Journal:  Biophys J       Date:  2011-10-19       Impact factor: 4.033

7.  Molecular dynamics as a tool to detect protein foldability. A mutant of domain B1 of protein G with non-native secondary structure propensities.

Authors:  D Cregut; L Serrano
Journal:  Protein Sci       Date:  1999-02       Impact factor: 6.725

8.  Synthesis, folding, and structure of the beta-turn mimic modified B1 domain of streptococcal protein G.

Authors:  B Odaert; F Jean; C Boutillon; E Buisine; O Melnyk; A Tartar; G Lippens
Journal:  Protein Sci       Date:  1999-12       Impact factor: 6.725

9.  Correspondence between anomalous m- and DeltaCp-values in protein folding.

Authors:  Daniel E Otzen; Mikael Oliveberg
Journal:  Protein Sci       Date:  2004-12       Impact factor: 6.725

Review 10.  Early events in protein folding explored by rapid mixing methods.

Authors:  Heinrich Roder; Kosuke Maki; Hong Cheng
Journal:  Chem Rev       Date:  2006-05       Impact factor: 60.622

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.