Literature DB >> 10871386

Loop-mediated isothermal amplification of DNA.

T Notomi1, H Okayama, H Masubuchi, T Yonekawa, K Watanabe, N Amino, T Hase.   

Abstract

We have developed a novel method, termed loop-mediated isothermal amplification (LAMP), that amplifies DNA with high specificity, efficiency and rapidity under isothermal conditions. This method employs a DNA polymerase and a set of four specially designed primers that recognize a total of six distinct sequences on the target DNA. An inner primer containing sequences of the sense and antisense strands of the target DNA initiates LAMP. The following strand displacement DNA synthesis primed by an outer primer releases a single-stranded DNA. This serves as template for DNA synthesis primed by the second inner and outer primers that hybridize to the other end of the target, which produces a stem-loop DNA structure. In subsequent LAMP cycling one inner primer hybridizes to the loop on the product and initiates displacement DNA synthesis, yielding the original stem-loop DNA and a new stem-loop DNA with a stem twice as long. The cycling reaction continues with accumulation of 10(9) copies of target in less than an hour. The final products are stem-loop DNAs with several inverted repeats of the target and cauliflower-like structures with multiple loops formed by annealing between alternately inverted repeats of the target in the same strand. Because LAMP recognizes the target by six distinct sequences initially and by four distinct sequences afterwards, it is expected to amplify the target sequence with high selectivity.

Mesh:

Substances:

Year:  2000        PMID: 10871386      PMCID: PMC102748          DOI: 10.1093/nar/28.12.e63

Source DB:  PubMed          Journal:  Nucleic Acids Res        ISSN: 0305-1048            Impact factor:   16.971


  15 in total

1.  Strand displacement amplification--an isothermal, in vitro DNA amplification technique.

Authors:  G T Walker; M S Fraiser; J L Schram; M C Little; J G Nadeau; D P Malinowski
Journal:  Nucleic Acids Res       Date:  1992-04-11       Impact factor: 16.971

2.  Nucleic acid sequence-based amplification.

Authors:  J Compton
Journal:  Nature       Date:  1991-03-07       Impact factor: 49.962

3.  Isothermal in vitro amplification of DNA by a restriction enzyme/DNA polymerase system.

Authors:  G T Walker; M C Little; J G Nadeau; D D Shank
Journal:  Proc Natl Acad Sci U S A       Date:  1992-01-01       Impact factor: 11.205

4.  Isothermal, in vitro amplification of nucleic acids by a multienzyme reaction modeled after retroviral replication.

Authors:  J C Guatelli; K M Whitfield; D Y Kwoh; K J Barringer; D D Richman; T R Gingeras
Journal:  Proc Natl Acad Sci U S A       Date:  1990-03       Impact factor: 11.205

5.  Uniform amplification of a mixture of deoxyribonucleic acids with varying GC content.

Authors:  N Baskaran; R P Kandpal; A K Bhargava; M W Glynn; A Bale; S M Weissman
Journal:  Genome Res       Date:  1996-07       Impact factor: 9.043

6.  Properties of strand displacement synthesis by Moloney murine leukemia virus reverse transcriptase: mechanistic implications.

Authors:  S H Whiting; J J Champoux
Journal:  J Mol Biol       Date:  1998-05-08       Impact factor: 5.469

7.  Enzymatic amplification of beta-globin genomic sequences and restriction site analysis for diagnosis of sickle cell anemia.

Authors:  R K Saiki; S Scharf; F Faloona; K B Mullis; G T Horn; H A Erlich; N Arnheim
Journal:  Science       Date:  1985-12-20       Impact factor: 47.728

8.  Enhanced reverse transcriptase-polymerase chain reaction for prostate specific antigen as an indicator of true pathologic stage in patients with prostate cancer.

Authors:  A E Katz; G M de Vries; M D Begg; A J Raffo; C Cama; K O'Toole; R Buttyan; M C Benson; C A Olsson
Journal:  Cancer       Date:  1995-04-01       Impact factor: 6.860

9.  Betaine can eliminate the base pair composition dependence of DNA melting.

Authors:  W A Rees; T D Yager; J Korte; P H von Hippel
Journal:  Biochemistry       Date:  1993-01-12       Impact factor: 3.162

10.  Molecular staging of prostate cancer with the use of an enhanced reverse transcriptase-PCR assay.

Authors:  A E Katz; C A Olsson; A J Raffo; C Cama; H Perlman; E Seaman; K M O'Toole; D McMahon; M C Benson; R Buttyan
Journal:  Urology       Date:  1994-06       Impact factor: 2.649

View more
  1749 in total

Review 1.  Methods for molecular surveillance of influenza.

Authors:  Ruixue Wang; Jeffery K Taubenberger
Journal:  Expert Rev Anti Infect Ther       Date:  2010-05       Impact factor: 5.091

2.  Detection of single-nucleotide polymorphisms in Plasmodium falciparum by PCR primer extension and lateral flow immunoassay.

Authors:  A P H A Moers; R L Hallett; R Burrow; H D F H Schallig; C J Sutherland; A van Amerongen
Journal:  Antimicrob Agents Chemother       Date:  2014-11-03       Impact factor: 5.191

Review 3.  Sample pretreatment and nucleic acid-based detection for fast diagnosis utilizing microfluidic systems.

Authors:  Jung-Hao Wang; Chih-Hung Wang; Gwo-Bin Lee
Journal:  Ann Biomed Eng       Date:  2011-12-07       Impact factor: 3.934

4.  Sensitive and rapid detection of the insect pathogenic fungus Metarhizium anisopliae var. anisopliae by loop-mediated isothermal amplification.

Authors:  Ya Li; Shuang-Hu Cai
Journal:  Curr Microbiol       Date:  2011-01-28       Impact factor: 2.188

5.  Rapid and sensitive detection of Listeria monocytogenes by loop-mediated isothermal amplification.

Authors:  Meng-Jun Tang; Sheng Zhou; Xiao-Yan Zhang; Jun-Hua Pu; Qing-Lian Ge; Xiu-Jun Tang; Yu-Shi Gao
Journal:  Curr Microbiol       Date:  2011-09-21       Impact factor: 2.188

6.  A loop-mediated isothermal amplification (LAMP) assay for Strongyloides stercoralis in stool that uses a visual detection method with SYTO-82 fluorescent dye.

Authors:  Matthew R Watts; Gregory James; Yasmin Sultana; Andrew N Ginn; Alexander C Outhred; Fanrong Kong; Jaco J Verweij; Jonathan R Iredell; Sharon C-A Chen; Rogan Lee
Journal:  Am J Trop Med Hyg       Date:  2013-12-09       Impact factor: 2.345

7.  Diagnostic tools for tackling febrile illness and enhancing patient management.

Authors:  Konstantinos Mitsakakis; Valérie D'Acremont; Sebastian Hin; Felix von Stetten; Roland Zengerle
Journal:  Microelectron Eng       Date:  2018-10-05       Impact factor: 2.523

8.  Visual Detection of Brucella spp. in Spiked Bovine Semen Using Loop-Mediated Isothermal Amplification (LAMP) Assay.

Authors:  Bikash R Prusty; Pallab Chaudhuri; V K Chaturvedi; Mohini Saini; B P Mishra; Praveen K Gupta
Journal:  Indian J Microbiol       Date:  2016-01-05       Impact factor: 2.461

9.  Mechanistic evaluation of the pros and cons of digital RT-LAMP for HIV-1 viral load quantification on a microfluidic device and improved efficiency via a two-step digital protocol.

Authors:  Bing Sun; Feng Shen; Stephanie E McCalla; Jason E Kreutz; Mikhail A Karymov; Rustem F Ismagilov
Journal:  Anal Chem       Date:  2013-01-16       Impact factor: 6.986

10.  Visual loop-mediated isothermal amplification (LAMP) for the rapid diagnosis of Enterocytozoon hepatopenaei (EHP) infection.

Authors:  Sathish Kumar T; Navaneeth Krishnan A; Joseph Sahaya Rajan J; Makesh M; Jithendran K P; Alavandi S V; Vijayan K K
Journal:  Parasitol Res       Date:  2018-03-17       Impact factor: 2.289

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.