Literature DB >> 14710189

Adaptation to extreme environments: macromolecular dynamics in bacteria compared in vivo by neutron scattering.

Moeava Tehei1, Bruno Franzetti, Dominique Madern, Margaret Ginzburg, Ben Z Ginzburg, Marie-Thérèse Giudici-Orticoni, Mireille Bruschi, Giuseppe Zaccai.   

Abstract

Mean macromolecular dynamics was quantified in vivo by neutron scattering in psychrophile, mesophile, thermophile and hyperthermophile bacteria. Root mean square atomic fluctuation amplitudes determining macromolecular flexibility were found to be similar for each organism at its physiological temperature ( approximately 1 A in the 0.1 ns timescale). Effective force constants determining the mean macromolecular resilience were found to increase with physiological temperature from 0.2 N/m for the psychrophiles, which grow at 4 degrees C, to 0.6 N/m for the hyperthermophiles (85 degrees C), indicating that the increase in stabilization free energy is dominated by enthalpic rather than entropic terms. Larger resilience allows macromolecular stability at high temperatures, while maintaining flexibility within acceptable limits for biological activity.

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Year:  2004        PMID: 14710189      PMCID: PMC1298960          DOI: 10.1038/sj.embor.7400049

Source DB:  PubMed          Journal:  EMBO Rep        ISSN: 1469-221X            Impact factor:   8.807


  33 in total

1.  Unfolding pathways of individual bacteriorhodopsins.

Authors:  F Oesterhelt; D Oesterhelt; M Pfeiffer; A Engel; H E Gaub; D J Müller
Journal:  Science       Date:  2000-04-07       Impact factor: 47.728

Review 2.  How soft is a protein? A protein dynamics force constant measured by neutron scattering.

Authors:  G Zaccai
Journal:  Science       Date:  2000-06-02       Impact factor: 47.728

3.  Protein flexibility from the dynamical transition: a force constant analysis.

Authors:  D J Bicout; G Zaccai
Journal:  Biophys J       Date:  2001-03       Impact factor: 4.033

Review 4.  Psychrophilic enzymes: revisiting the thermodynamic parameters of activation may explain local flexibility.

Authors:  T Lonhienne; C Gerday; G Feller
Journal:  Biochim Biophys Acta       Date:  2000-11-30

5.  Structural and genomic correlates of hyperthermostability.

Authors:  C Cambillau; J M Claverie
Journal:  J Biol Chem       Date:  2000-10-20       Impact factor: 5.157

6.  A view of dynamics changes in the molten globule-native folding step by quasielastic neutron scattering.

Authors:  Z Bu; D A Neumann; S H Lee; C M Brown; D M Engelman; C C Han
Journal:  J Mol Biol       Date:  2000-08-11       Impact factor: 5.469

7.  Structural equilibrium fluctuations in mesophilic and thermophilic alpha-amylase.

Authors:  J Fitter; J Heberle
Journal:  Biophys J       Date:  2000-09       Impact factor: 4.033

Review 8.  How enzymes adapt: lessons from directed evolution.

Authors:  F H Arnold; P L Wintrode; K Miyazaki; A Gershenson
Journal:  Trends Biochem Sci       Date:  2001-02       Impact factor: 13.807

9.  Xylanase from the psychrophilic yeast Cryptococcus adeliae.

Authors:  I Petrescu; J Lamotte-Brasseur; J P Chessa; P Ntarima; M Claeyssens; B Devreese; G Marino; C Gerday
Journal:  Extremophiles       Date:  2000-06       Impact factor: 2.395

10.  Millisecond time scale conformational flexibility in a hyperthermophile protein at ambient temperature.

Authors:  G Hernandez; F E Jenney; M W Adams; D M LeMaster
Journal:  Proc Natl Acad Sci U S A       Date:  2000-03-28       Impact factor: 11.205

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  42 in total

Review 1.  The effect of water on protein dynamics.

Authors:  G Zaccai
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2004-08-29       Impact factor: 6.237

2.  Kinetic and structural optimization to catalysis at low temperatures in a psychrophilic cellulase from the Antarctic bacterium Pseudoalteromonas haloplanktis.

Authors:  Geneviève Garsoux; Josette Lamotte; Charles Gerday; Georges Feller
Journal:  Biochem J       Date:  2004-12-01       Impact factor: 3.857

3.  Protein dynamics in solution and powder measured by incoherent elastic neutron scattering: the influence of Q-range and energy resolution.

Authors:  Frank Gabel
Journal:  Eur Biophys J       Date:  2004-09-16       Impact factor: 1.733

4.  Crowding induces differences in the diffusion of thermophilic and mesophilic proteins: a new look at neutron scattering results.

Authors:  Enrique Marcos; Pau Mestres; Ramon Crehuet
Journal:  Biophys J       Date:  2011-12-07       Impact factor: 4.033

5.  Coupled protein domain motion in Taq polymerase revealed by neutron spin-echo spectroscopy.

Authors:  Zimei Bu; Ralf Biehl; Michael Monkenbusch; Dieter Richter; David J E Callaway
Journal:  Proc Natl Acad Sci U S A       Date:  2005-11-23       Impact factor: 11.205

Review 6.  Life at low temperatures: is disorder the driving force?

Authors:  Georges Feller
Journal:  Extremophiles       Date:  2006-12-08       Impact factor: 2.395

Review 7.  Cold-adapted enzymes from marine Antarctic microorganisms.

Authors:  J-C Marx; T Collins; S D'Amico; G Feller; C Gerday
Journal:  Mar Biotechnol (NY)       Date:  2006-12-29       Impact factor: 3.619

8.  Cold-active enzymes studied by comparative molecular dynamics simulation.

Authors:  Vojtech Spiwok; Petra Lipovová; Tereza Skálová; Jarmila Dusková; Jan Dohnálek; Jindrich Hasek; Nicholas J Russell; Blanka Králová
Journal:  J Mol Model       Date:  2007-01-18       Impact factor: 1.810

9.  The linker region plays a key role in the adaptation to cold of the cellulase from an Antarctic bacterium.

Authors:  Guillaume K Sonan; Véronique Receveur-Brechot; Colette Duez; Nushin Aghajari; Mirjam Czjzek; Richard Haser; Charles Gerday
Journal:  Biochem J       Date:  2007-10-15       Impact factor: 3.857

10.  Down to atomic-scale intracellular water dynamics.

Authors:  Marion Jasnin; Martine Moulin; Martina Moulin; Michael Haertlein; Giuseppe Zaccai; Moeava Tehei
Journal:  EMBO Rep       Date:  2008-05-02       Impact factor: 8.807

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