Literature DB >> 17160345

Life at low temperatures: is disorder the driving force?

Georges Feller1.   

Abstract

The thermodynamic characterization of various biological systems from psychrophiles points to a larger entropic contribution when compared to the corresponding mesophilic or (hyper) thermophilic counterparts, either at the level of the macromolecules (thermodynamic and kinetic stabilities) or of their function (ligand binding, catalytic activity). It is suggested here that in an environment characterized by a low heat content (enthalpy) and at temperatures that strongly slowdown molecular motions, the cold-adapted biological systems rely on a larger disorder to maintain macromolecular dynamics and function. Such pre-eminent involvement of entropy is observed in the experimental results and, from a macroscopic point of view, is also reflected for instance by the steric hindrances introduced by cis-unsaturated and branched lipids to maintain membrane fluidity, by the loose conformation of psychrophilic proteins or by the local destabilization of tRNA by dihydrouridine in psychrophilic bacteria.

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Year:  2006        PMID: 17160345     DOI: 10.1007/s00792-006-0050-1

Source DB:  PubMed          Journal:  Extremophiles        ISSN: 1431-0651            Impact factor:   2.395


  28 in total

1.  Structural determinants of cold adaptation and stability in a large protein.

Authors:  S D'Amico; C Gerday; G Feller
Journal:  J Biol Chem       Date:  2001-04-26       Impact factor: 5.157

Review 2.  Cold adapted enzymes.

Authors:  A O Smalås; H K Leiros; V Os; N P Willassen
Journal:  Biotechnol Annu Rev       Date:  2000

3.  Maximal stabilities of reversible two-state proteins.

Authors:  Sandeep Kumar; Chung-Jung Tsai; Ruth Nussinov
Journal:  Biochemistry       Date:  2002-04-30       Impact factor: 3.162

4.  Temperature range of thermodynamic stability for the native state of reversible two-state proteins.

Authors:  Sandeep Kumar; Chung Jung Tsai; Ruth Nussinov
Journal:  Biochemistry       Date:  2003-05-06       Impact factor: 3.162

Review 5.  Cold denaturation of proteins.

Authors:  P L Privalov
Journal:  Crit Rev Biochem Mol Biol       Date:  1990       Impact factor: 8.250

6.  Experiment-guided thermodynamic simulations on reversible two-state proteins: implications for protein thermostability.

Authors:  Sandeep Kumar; Ruth Nussinov
Journal:  Biophys Chem       Date:  2004-11-01       Impact factor: 2.352

7.  Protein flexibility acclimatizes photosynthetic energy conversion to the ambient temperature.

Authors:  Oksana Shlyk-Kerner; Ilan Samish; David Kaftan; Neta Holland; P S Maruthi Sai; Hadar Kless; Avigdor Scherz
Journal:  Nature       Date:  2006-07-23       Impact factor: 49.962

8.  Relationships between genomic G+C content, RNA secondary structures, and optimal growth temperature in prokaryotes.

Authors:  N Galtier; J R Lobry
Journal:  J Mol Evol       Date:  1997-06       Impact factor: 2.395

9.  Enzyme dynamics and hydrogen tunnelling in a thermophilic alcohol dehydrogenase.

Authors:  A Kohen; R Cannio; S Bartolucci; J P Klinman
Journal:  Nature       Date:  1999-06-03       Impact factor: 49.962

10.  Posttranscriptional modification of tRNA in psychrophilic bacteria.

Authors:  J J Dalluge; T Hamamoto; K Horikoshi; R Y Morita; K O Stetter; J A McCloskey
Journal:  J Bacteriol       Date:  1997-03       Impact factor: 3.490

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  25 in total

1.  Psychrobacter arcticus 273-4 uses resource efficiency and molecular motion adaptations for subzero temperature growth.

Authors:  Peter W Bergholz; Corien Bakermans; James M Tiedje
Journal:  J Bacteriol       Date:  2009-01-23       Impact factor: 3.490

2.  The role of semidisorder in temperature adaptation of bacterial FlgM proteins.

Authors:  Jihua Wang; Yuedong Yang; Zanxia Cao; Zhixiu Li; Huiying Zhao; Yaoqi Zhou
Journal:  Biophys J       Date:  2013-12-03       Impact factor: 4.033

3.  Amino acid contacts in proteins adapted to different temperatures: hydrophobic interactions and surface charges play a key role.

Authors:  Gisle Saelensminde; Øyvind Halskau; Inge Jonassen
Journal:  Extremophiles       Date:  2008-09-30       Impact factor: 2.395

4.  Sequence-based analysis of protein energy landscapes reveals nonuniform thermal adaptation within the proteome.

Authors:  Jenny Gu; Vincent J Hilser
Journal:  Mol Biol Evol       Date:  2009-07-10       Impact factor: 16.240

Review 5.  The microbial diversity, distribution, and ecology of permafrost in China: a review.

Authors:  Weigang Hu; Qi Zhang; Tian Tian; Guodong Cheng; Lizhe An; Huyuan Feng
Journal:  Extremophiles       Date:  2015-04-30       Impact factor: 2.395

6.  Identification of a long-range protein network that modulates active site dynamics in extremophilic alcohol dehydrogenases.

Authors:  Zachary D Nagel; Shujian Cun; Judith P Klinman
Journal:  J Biol Chem       Date:  2013-03-22       Impact factor: 5.157

Review 7.  Metabolism in bacteria at low temperature: a recent report.

Authors:  Dipanwita Sengupta; Madhab K Chattopadhyay
Journal:  J Biosci       Date:  2013-06       Impact factor: 1.826

8.  Increased Biomass Production by Mesophilic Food-Associated Bacteria through Lowering the Growth Temperature from 30°C to 10°C.

Authors:  Waldemar Seel; Julia Derichs; André Lipski
Journal:  Appl Environ Microbiol       Date:  2016-06-13       Impact factor: 4.792

9.  Kinetic and thermodynamic studies of peptidyltransferase in ribosomes from the extreme thermophile Thermus thermophilus.

Authors:  Daniel Rodriguez-Correa; Albert E Dahlberg
Journal:  RNA       Date:  2008-09-29       Impact factor: 4.942

10.  Effect of temperature on growth parameters of psychrophilic bacteria and yeasts.

Authors:  Rosa Margesin
Journal:  Extremophiles       Date:  2008-12-05       Impact factor: 2.395

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