Literature DB >> 15287848

Kinetic and structural optimization to catalysis at low temperatures in a psychrophilic cellulase from the Antarctic bacterium Pseudoalteromonas haloplanktis.

Geneviève Garsoux1, Josette Lamotte, Charles Gerday, Georges Feller.   

Abstract

The cold-adapted cellulase CelG has been purified from the culture supernatant of the Antarctic bacterium Pseudoalteromonas haloplanktis and the gene coding for this enzyme has been cloned, sequenced and expressed in Escherichia coli. This cellulase is composed of three structurally and functionally distinct regions: an N-terminal catalytic domain belonging to glycosidase family 5 and a C-terminal cellulose-binding domain belonging to carbohydrate-binding module family 5. The linker of 107 residues connecting both domains is one of the longest found in cellulases, and optimizes substrate accessibility to the catalytic domain by drastically increasing the surface of cellulose available to a bound enzyme molecule. The psychrophilic enzyme is closely related to the cellulase Cel5 from Erwinia chrysanthemi. Both kcat and kcat/K(m) values at 4 degrees C for the psychrophilic cellulase are similar to the values for Cel5 at 30-35 degrees C, suggesting temperature adaptation of the kinetic parameters. The thermodynamic parameters of activation of CelG suggest a heat-labile, relatively disordered active site with low substrate affinity, in agreement with the experimental data. The structure of CelG has been constructed by homology modelling with a molecule of cellotetraose docked into the active site. No structural alteration related to cold-activity can be found in the catalytic cleft, whereas several structural factors in the overall structure can explain the weak thermal stability, suggesting that the loss of stability provides the required active-site mobility at low temperatures.

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Year:  2004        PMID: 15287848      PMCID: PMC1134107          DOI: 10.1042/BJ20040325

Source DB:  PubMed          Journal:  Biochem J        ISSN: 0264-6021            Impact factor:   3.857


  40 in total

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Authors:  Y Shoham; R Lamed; E A Bayer
Journal:  Trends Microbiol       Date:  1999-07       Impact factor: 17.079

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Authors:  A O Smalås; H K Leiros; V Os; N P Willassen
Journal:  Biotechnol Annu Rev       Date:  2000

Review 3.  Psychrophilic enzymes: revisiting the thermodynamic parameters of activation may explain local flexibility.

Authors:  T Lonhienne; C Gerday; G Feller
Journal:  Biochim Biophys Acta       Date:  2000-11-30

4.  Type II protein secretion in gram-negative pathogenic bacteria: the study of the structure/secretion relationships of the cellulase Cel5 (formerly EGZ) from Erwinia chrysanthemi.

Authors:  V Chapon; M Czjzek; M El Hassouni; B Py; M Juy; F Barras
Journal:  J Mol Biol       Date:  2001-07-27       Impact factor: 5.469

5.  Comparative structural analysis of psychrophilic and meso- and thermophilic enzymes.

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Journal:  Proteins       Date:  2002-05-01

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Authors:  T Lonhienne; E Baise; G Feller; V Bouriotis; C Gerday
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8.  Cellulase EGZ of Erwinia chrysanthemi: structural organization and importance of His98 and Glu133 residues for catalysis.

Authors:  B Py; I Bortoli-German; J Haiech; M Chippaux; F Barras
Journal:  Protein Eng       Date:  1991-02

9.  Cellulose-binding domains promote hydrolysis of different sites on crystalline cellulose.

Authors:  G Carrard; A Koivula; H Söderlund; P Béguin
Journal:  Proc Natl Acad Sci U S A       Date:  2000-09-12       Impact factor: 11.205

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  30 in total

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Authors:  Guillaume K Sonan; Véronique Receveur-Brechot; Colette Duez; Nushin Aghajari; Mirjam Czjzek; Richard Haser; Charles Gerday
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5.  Purification, Characterization, and Gene Cloning of a Cold-Adapted Endo-1,4-β-glucanase from Bellamya chinensis laeta.

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6.  Cold adaptation of tRNA nucleotidyltransferases: A tradeoff in activity, stability and fidelity.

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Review 7.  Different methodologies for sustainability of optimization techniques used in submerged and solid state fermentation.

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Review 8.  Marine metagenomics: new tools for the study and exploitation of marine microbial metabolism.

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9.  Cloning and Characterizing the Thermophilic and Detergent Stable Cellulase CelMytB from Saccharophagus sp. Myt-1.

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10.  Sequence and structural investigation of a novel psychrophilic α-amylase from Glaciozyma antarctica PI12 for cold-adaptation analysis.

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