Literature DB >> 15306381

The effect of water on protein dynamics.

G Zaccai1.   

Abstract

Neutron diffraction and spectroscopy were applied to describe the hydration and dynamics of a soluble protein and a natural membrane from extreme halophilic Archaea. The quantitative dependence of protein motions on water activity was clearly illustrated, and it was established that a minimum hydration shell is required for the systems to access their functional resilience, i.e. a dynamics state that allows biological activity.

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Year:  2004        PMID: 15306381      PMCID: PMC1693409          DOI: 10.1098/rstb.2004.1503

Source DB:  PubMed          Journal:  Philos Trans R Soc Lond B Biol Sci        ISSN: 0962-8436            Impact factor:   6.237


  28 in total

1.  Incoherent neutron scattering of copper azurin: a comparison with molecular dynamics simulation results.

Authors:  A Paciaroni; M E Stroppolo; C Arcangeli; A R Bizzarri; A Desideri; S Cannistraro
Journal:  Eur Biophys J       Date:  1999       Impact factor: 1.733

Review 2.  How soft is a protein? A protein dynamics force constant measured by neutron scattering.

Authors:  G Zaccai
Journal:  Science       Date:  2000-06-02       Impact factor: 47.728

Review 3.  Halophilic adaptation of enzymes.

Authors:  D Madern; C Ebel; G Zaccai
Journal:  Extremophiles       Date:  2000-04       Impact factor: 2.395

4.  Protein flexibility from the dynamical transition: a force constant analysis.

Authors:  D J Bicout; G Zaccai
Journal:  Biophys J       Date:  2001-03       Impact factor: 4.033

5.  Solvent dependence of dynamic transitions in protein solutions.

Authors:  V Réat; R Dunn; M Ferrand; J L Finney; R M Daniel; J C Smith
Journal:  Proc Natl Acad Sci U S A       Date:  2000-08-29       Impact factor: 11.205

Review 6.  The structure and mechanism of the family of retinal proteins from halophilic archaea.

Authors:  D Oesterhelt
Journal:  Curr Opin Struct Biol       Date:  1998-08       Impact factor: 6.809

7.  Thermal motions in bacteriorhodopsin at different hydration levels studied by neutron scattering: correlation with kinetics and light-induced conformational changes.

Authors:  U Lehnert; V Réat; M Weik; G Zaccaï; C Pfister
Journal:  Biophys J       Date:  1998-10       Impact factor: 4.033

8.  Harmonic behavior of trehalose-coated carbon-monoxy-myoglobin at high temperature.

Authors:  L Cordone; M Ferrand; E Vitrano; G Zaccai
Journal:  Biophys J       Date:  1999-02       Impact factor: 4.033

9.  Quasi-Laue neutron-diffraction study of the water arrangement in crystals of triclinic hen egg-white lysozyme.

Authors:  C Bon; M S Lehmann; C Wilkinson
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  1999-05

10.  Enzyme dynamics and activity: time-scale dependence of dynamical transitions in glutamate dehydrogenase solution.

Authors:  R M Daniel; J L Finney; V Réat; R Dunn; M Ferrand; J C Smith
Journal:  Biophys J       Date:  1999-10       Impact factor: 4.033

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  14 in total

1.  Hemoglobin senses body temperature.

Authors:  G M Artmann; Ilya Digel; K F Zerlin; Ch Maggakis-Kelemen; Pt Linder; D Porst; P Kayser; A M Stadler; G Dikta; A Temiz Artmann
Journal:  Eur Biophys J       Date:  2009-02-24       Impact factor: 1.733

2.  Enzymatic turnover of macromolecules generates long-lasting protein-water-coupled motions beyond reaction steady state.

Authors:  Jessica Dielmann-Gessner; Moran Grossman; Valeria Conti Nibali; Benjamin Born; Inna Solomonov; Gregg B Fields; Martina Havenith; Irit Sagi
Journal:  Proc Natl Acad Sci U S A       Date:  2014-11-25       Impact factor: 11.205

3.  Neutron scattering reveals extremely slow cell water in a Dead Sea organism.

Authors:  Moeava Tehei; Bruno Franzetti; Kathleen Wood; Frank Gabel; Elisa Fabiani; Marion Jasnin; Michaela Zamponi; Dieter Oesterhelt; Giuseppe Zaccai; Margaret Ginzburg; Ben-Zion Ginzburg
Journal:  Proc Natl Acad Sci U S A       Date:  2007-01-10       Impact factor: 11.205

4.  Mapping the hydration dynamics of ubiquitin.

Authors:  Nathaniel V Nucci; Maxim S Pometun; A Joshua Wand
Journal:  J Am Chem Soc       Date:  2011-07-22       Impact factor: 15.419

5.  Characterizing Protein Hydration Dynamics Using Solution NMR Spectroscopy.

Authors:  Christine Jorge; Bryan S Marques; Kathleen G Valentine; A Joshua Wand
Journal:  Methods Enzymol       Date:  2018-12-04       Impact factor: 1.600

6.  Low-temperature molecular dynamics simulations of horse heart cytochrome c and comparison with inelastic neutron scattering data.

Authors:  Wojciech Pulawski; Slawomir Filipek; Anna Zwolinska; Aleksander Debinski; Krystiana Krzysko; Ramón Garduño-Juárez; Sowmya Viswanathan; Venkatesan Renugopalakrishnan
Journal:  Eur Biophys J       Date:  2012-12-08       Impact factor: 1.733

7.  Molecular processes in biological thermosensation.

Authors:  I Digel; P Kayser; G M Artmann
Journal:  J Biophys       Date:  2008-05-12

8.  Site-resolved measurement of water-protein interactions by solution NMR.

Authors:  Nathaniel V Nucci; Maxim S Pometun; A Joshua Wand
Journal:  Nat Struct Mol Biol       Date:  2011-01-02       Impact factor: 15.369

9.  Function and biotechnology of extremophilic enzymes in low water activity.

Authors:  Ram Karan; Melinda D Capes; Shiladitya Dassarma
Journal:  Aquat Biosyst       Date:  2012-02-02

10.  Water-protein interactions: the secret of protein dynamics.

Authors:  Silvia Martini; Claudia Bonechi; Alberto Foletti; Claudio Rossi
Journal:  ScientificWorldJournal       Date:  2013-05-22
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