Literature DB >> 12914445

Characterization of collagen model peptides containing 4-fluoroproline; (4(S)-fluoroproline-pro-gly)10 forms a triple helix, but (4(R)-fluoroproline-pro-gly)10 does not.

Masamitsu Doi1, Yoshinori Nishi, Susumu Uchiyama, Yuji Nishiuchi, Takashi Nakazawa, Tadayasu Ohkubo, Yuji Kobayashi.   

Abstract

Collagen model peptide (Pro-Pro-Gly)10 has a triple helical structure and undergoes a thermal transition to a single random coil structure. The transition temperature of the analogous model peptides depends largely on amino acid substitution. Substitution of Pro by 4-hydroxyproline (Hyp) or 4-fluoroproline (fPro) has especially attracted attention because the position of substitution and chirality of the hydroxyl group or fluorine atom affect the transition temperatures. Here, we demonstrated that (4(S)-fPro-Pro-Gly)10 takes a triple helical structure, but (4(R)-fPro-Pro-Gly)10 exists in a single chain structure. This is not consistent with the case of Hyp substitution in our previous report where both (4(S)-Hyp-Pro-Gly)10 and (4(R)-Hyp-Pro-Gly)10 are in a single random coil state.

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Year:  2003        PMID: 12914445     DOI: 10.1021/ja035997v

Source DB:  PubMed          Journal:  J Am Chem Soc        ISSN: 0002-7863            Impact factor:   15.419


  18 in total

1.  Equilibrium thermal transitions of collagen model peptides.

Authors:  Anton V Persikov; Yujia Xu; Barbara Brodsky
Journal:  Protein Sci       Date:  2004-03-09       Impact factor: 6.725

2.  Reciprocity of steric and stereoelectronic effects in the collagen triple helix.

Authors:  Matthew D Shoulders; Jonathan A Hodges; Ronald T Raines
Journal:  J Am Chem Soc       Date:  2006-06-28       Impact factor: 15.419

3.  Interstrand dipole-dipole interactions can stabilize the collagen triple helix.

Authors:  Matthew D Shoulders; Ronald T Raines
Journal:  J Biol Chem       Date:  2011-04-10       Impact factor: 5.157

4.  The aberrance of the 4S diastereomer of 4-hydroxyproline.

Authors:  Matthew D Shoulders; Frank W Kotch; Amit Choudhary; Ilia A Guzei; Ronald T Raines
Journal:  J Am Chem Soc       Date:  2010-08-11       Impact factor: 15.419

5.  4-Fluoroprolines: Conformational Analysis and Effects on the Stability and Folding of Peptides and Proteins.

Authors:  Robert W Newberry; Ronald T Raines
Journal:  Top Heterocycl Chem       Date:  2016-01-12

6.  Synthesis of 5-fluoro- and 5-hydroxymethanoprolines via lithiation of N-BOC-methanopyrrolidines. Constrained Cγ-exo and Cγ-endo Flp and Hyp conformer mimics.

Authors:  Grant R Krow; Matthew D Shoulders; Ramakrishna Edupuganti; Deepa Gandla; Fang Yu; Philip E Sonnet; Matthew Sender; Amit Choudhary; Charles DeBrosse; Charles W Ross; Patrick Carroll; Ronald T Raines
Journal:  J Org Chem       Date:  2012-05-25       Impact factor: 4.354

Review 7.  Synthesis and biological applications of collagen-model triple-helical peptides.

Authors:  Gregg B Fields
Journal:  Org Biomol Chem       Date:  2010-01-20       Impact factor: 3.876

8.  Proline editing: a general and practical approach to the synthesis of functionally and structurally diverse peptides. Analysis of steric versus stereoelectronic effects of 4-substituted prolines on conformation within peptides.

Authors:  Anil K Pandey; Devan Naduthambi; Krista M Thomas; Neal J Zondlo
Journal:  J Am Chem Soc       Date:  2013-03-11       Impact factor: 15.419

9.  Enantioselective synthesis of (2R, 3S)- and (2S, 3R)-4,4,4-trifluoro-N-Fmoc-O-tert-butyl-threonine and their racemization-free incorporation into oligopeptides via solid-phase synthesis.

Authors:  Nu Xiao; Zhong-Xing Jiang; Y Bruce Yu
Journal:  Biopolymers       Date:  2007       Impact factor: 2.505

10.  4R- and 4S-iodophenyl hydroxyproline, 4R-pentynoyl hydroxyproline, and S-propargyl-4-thiolphenylalanine: conformationally biased and tunable amino acids for bioorthogonal reactions.

Authors:  Christina R Forbes; Anil K Pandey; Himal K Ganguly; Glenn P A Yap; Neal J Zondlo
Journal:  Org Biomol Chem       Date:  2016-01-25       Impact factor: 3.876

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