Literature DB >> 12525180

Protochlorophyllide oxidoreductase: "dark" reactions of a light-driven enzyme.

Derren J Heyes1, Alexander V Ruban, C Neil Hunter.   

Abstract

The light-driven enzyme NADPH:protochlorophyllide oxidoreductase (POR) catalyzes the reduction of protochlorophyllide (Pchlide) to chlorophyllide (Chlide), a key regulatory step in the chlorophyll biosynthesis pathway. As POR is light activated, it allows intermediates in the reaction pathway to be observed by initiating catalysis with illumination at low temperatures, a technique that has recently been used to study the initial photochemistry. Here, we use low-temperature spectroscopy to show that the catalytic mechanism of POR involves two additional steps, which do not require light and have been termed the "dark" reactions. The first of these involves the conversion of the product of the initial light-driven reaction, a nonfluorescent radical species, into a new intermediate that has an absorbance maximum at 681 nm and a fluorescence peak at 684 nm. During the second dark step this species gradually blue shifts to yield the product, Chlide. The temperature dependence for each of these two processes was measured; the data revealed that these steps could only occur close to or above the "glass transition" temperature of proteins, suggesting that domain movements and/or reorganization of the protein are required for these stages of the catalytic mechanism.

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Year:  2003        PMID: 12525180     DOI: 10.1021/bi0268448

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  17 in total

1.  Temperature derivative fluorescence spectroscopy as a tool to study dynamical changes in protein crystals.

Authors:  Martin Weik; Xavier Vernede; Antoine Royant; Dominique Bourgeois
Journal:  Biophys J       Date:  2004-05       Impact factor: 4.033

2.  Novel Insights into the Enzymology, Regulation and Physiological Functions of Light-dependent Protochlorophyllide Oxidoreductase in Angiosperms.

Authors:  Tatsuru Masuda; Ken-Ichiro Takamiya
Journal:  Photosynth Res       Date:  2004       Impact factor: 3.573

3.  Simultaneous measurements of solvent dynamics and functional kinetics in a light-activated enzyme.

Authors:  Guillaume Durin; Aude Delaunay; Claudine Darnault; Derren J Heyes; Antoine Royant; Xavier Vernede; C Neil Hunter; Martin Weik; Dominique Bourgeois
Journal:  Biophys J       Date:  2009-03-04       Impact factor: 4.033

Review 4.  Photocatalysis as the 'master switch' of photomorphogenesis in early plant development.

Authors:  Derren J Heyes; Shaowei Zhang; Aoife Taylor; Linus O Johannissen; Samantha J O Hardman; Sam Hay; Nigel S Scrutton
Journal:  Nat Plants       Date:  2021-03-08       Impact factor: 15.793

5.  COBRAMM 2.0 - A software interface for tailoring molecular electronic structure calculations and running nanoscale (QM/MM) simulations.

Authors:  Oliver Weingart; Artur Nenov; Piero Altoè; Ivan Rivalta; Javier Segarra-Martí; Irina Dokukina; Marco Garavelli
Journal:  J Mol Model       Date:  2018-09-03       Impact factor: 1.810

6.  Spectroscopic and kinetic characterization of the light-dependent enzyme protochlorophyllide oxidoreductase (POR) using monovinyl and divinyl substrates.

Authors:  Derren J Heyes; Jerzy Kruk; C Neil Hunter
Journal:  Biochem J       Date:  2006-02-15       Impact factor: 3.857

7.  Differential operation of dual protochlorophyllide reductases for chlorophyll biosynthesis in response to environmental oxygen levels in the cyanobacterium Leptolyngbya boryana.

Authors:  Shoji Yamazaki; Jiro Nomata; Yuichi Fujita
Journal:  Plant Physiol       Date:  2006-10-06       Impact factor: 8.340

8.  Plant Protochlorophyllide Oxidoreductases A and B: CATALYTIC EFFICIENCY AND INITIAL REACTION STEPS.

Authors:  Alessio Garrone; Nataliya Archipowa; Peter F Zipfel; Gudrun Hermann; Benjamin Dietzek
Journal:  J Biol Chem       Date:  2015-09-25       Impact factor: 5.157

9.  Mutagenesis alters the catalytic mechanism of the light-driven enzyme protochlorophyllide oxidoreductase.

Authors:  Binuraj R K Menon; Paul A Davison; C Neil Hunter; Nigel S Scrutton; Derren J Heyes
Journal:  J Biol Chem       Date:  2009-10-22       Impact factor: 5.157

10.  Cryogenic and laser photoexcitation studies identify multiple roles for active site residues in the light-driven enzyme protochlorophyllide oxidoreductase.

Authors:  Binuraj R K Menon; Jonathan P Waltho; Nigel S Scrutton; Derren J Heyes
Journal:  J Biol Chem       Date:  2009-05-13       Impact factor: 5.157

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