Literature DB >> 11980724

Post-termination complex disassembly by ribosome recycling factor, a functional tRNA mimic.

Go Hirokawa1, Michael C Kiel, Aiko Muto, Maria Selmer, V Samuel Raj, Anders Liljas, Kazuei Igarashi, Hideko Kaji, Akira Kaji.   

Abstract

Ribosome recycling factor (RRF) together with elongation factor G (EF-G) disassembles the post- termination ribosomal complex. Inhibitors of translocation, thiostrepton, viomycin and aminoglycosides, inhibited the release of tRNA and mRNA from the post-termination complex. In contrast, fusidic acid and a GTP analog that fix EF-G to the ribosome, allowing one round of tRNA translocation, inhibited mRNA but not tRNA release from the complex. The release of tRNA is a prerequisite for mRNA release but partially takes place with EF-G alone. The data are consistent with the notion that RRF binds to the A-site and is translocated to the P-site, releasing deacylated tRNA from the P- and E-sites. The final step, the release of mRNA, is accompanied by the release of RRF and EF-G from the ribosome. With the model post-termination complex, 70S ribosomes were released from the post-termination complex by the RRF reaction and were then dissociated into subunits by IF3.

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Year:  2002        PMID: 11980724      PMCID: PMC125990          DOI: 10.1093/emboj/21.9.2272

Source DB:  PubMed          Journal:  EMBO J        ISSN: 0261-4189            Impact factor:   11.598


  58 in total

1.  Cell-free translation reconstituted with purified components.

Authors:  Y Shimizu; A Inoue; Y Tomari; T Suzuki; T Yokogawa; K Nishikawa; T Ueda
Journal:  Nat Biotechnol       Date:  2001-08       Impact factor: 54.908

2.  The path of messenger RNA through the ribosome.

Authors:  G Z Yusupova; M M Yusupov; J H Cate; H F Noller
Journal:  Cell       Date:  2001-07-27       Impact factor: 41.582

Review 3.  The fourth step of protein synthesis: disassembly of the posttermination complex is catalyzed by elongation factor G and ribosome recycling factor, a near-perfect mimic of tRNA.

Authors:  A Kaji; M C Kiel; G Hirokawa; A R Muto; Y Inokuchi; H Kaji
Journal:  Cold Spring Harb Symp Quant Biol       Date:  2001

4.  STREPTOMYCIN, SUPPRESSION, AND THE CODE.

Authors:  J DAVIES; W GILBERT; L GORINI
Journal:  Proc Natl Acad Sci U S A       Date:  1964-05       Impact factor: 11.205

5.  Solution structure of the ribosome recycling factor from Aquifex aeolicus.

Authors:  T Yoshida; S Uchiyama; H Nakano; H Kashimori; H Kijima; T Ohshima; Y Saihara; T Ishino; H Shimahara; T Yoshida; K Yokose; T Ohkubo; A Kaji; Y Kobayashi
Journal:  Biochemistry       Date:  2001-02-27       Impact factor: 3.162

6.  Mechanism of protein synthesis inhibition by fusidic acid and related antibiotics.

Authors:  N Tanaka; T Kinoshita; H Masukawa
Journal:  Biochem Biophys Res Commun       Date:  1968-02-15       Impact factor: 3.575

7.  Binding of specific sRNA to template ribosome complex: effect of proteolytic enzymes.

Authors:  H Kaji; I Suzuka; A Kaji
Journal:  J Mol Biol       Date:  1966-07       Impact factor: 5.469

8.  Sedimentation studies on aminoacyl-sRNA synthetase and activation of aminoacyl-sRNA transfer factor.

Authors:  K Momose; A Kaji
Journal:  Arch Biochem Biophys       Date:  1965-08       Impact factor: 4.013

9.  Specific binding of sRNA to ribosomes: effect of streptomycin.

Authors:  H Kaji; A Kaji
Journal:  Proc Natl Acad Sci U S A       Date:  1965-07       Impact factor: 11.205

10.  Specific interaction between the ribosome recycling factor and the elongation factor G from Mycobacterium tuberculosis mediates peptidyl-tRNA release and ribosome recycling in Escherichia coli.

Authors:  A R Rao; U Varshney
Journal:  EMBO J       Date:  2001-06-01       Impact factor: 11.598

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  49 in total

1.  Ribosome recycling step in yeast cytoplasmic protein synthesis is catalyzed by eEF3 and ATP.

Authors:  Shinya Kurata; Klaus H Nielsen; Sarah F Mitchell; Jon R Lorsch; Akira Kaji; Hideko Kaji
Journal:  Proc Natl Acad Sci U S A       Date:  2010-06-01       Impact factor: 11.205

2.  Visualization of ribosome-recycling factor on the Escherichia coli 70S ribosome: functional implications.

Authors:  Rajendra K Agrawal; Manjuli R Sharma; Michael C Kiel; Go Hirokawa; Timothy M Booth; Christian M T Spahn; Robert A Grassucci; Akira Kaji; Joachim Frank
Journal:  Proc Natl Acad Sci U S A       Date:  2004-06-03       Impact factor: 11.205

3.  Structural insights into initial and intermediate steps of the ribosome-recycling process.

Authors:  Takeshi Yokoyama; Tanvir R Shaikh; Nobuhiro Iwakura; Hideko Kaji; Akira Kaji; Rajendra K Agrawal
Journal:  EMBO J       Date:  2012-03-02       Impact factor: 11.598

4.  HflX is a ribosome-splitting factor rescuing stalled ribosomes under stress conditions.

Authors:  Yanqing Zhang; Chandra Sekhar Mandava; Wei Cao; Xiaojing Li; Dejiu Zhang; Ningning Li; Yixiao Zhang; Xiaoxiao Zhang; Yan Qin; Kaixia Mi; Jianlin Lei; Suparna Sanyal; Ning Gao
Journal:  Nat Struct Mol Biol       Date:  2015-10-12       Impact factor: 15.369

5.  X-ray crystallography study on ribosome recycling: the mechanism of binding and action of RRF on the 50S ribosomal subunit.

Authors:  Daniel N Wilson; Frank Schluenzen; Joerg M Harms; Takuya Yoshida; Tadayasu Ohkubo; Renate Albrecht; Joerg Buerger; Yuji Kobayashi; Paola Fucini
Journal:  EMBO J       Date:  2004-12-23       Impact factor: 11.598

Review 6.  Initiation of protein synthesis in bacteria.

Authors:  Brian Søgaard Laursen; Hans Peter Sørensen; Kim Kusk Mortensen; Hans Uffe Sperling-Petersen
Journal:  Microbiol Mol Biol Rev       Date:  2005-03       Impact factor: 11.056

Review 7.  Mechanism of recycling of post-termination ribosomal complexes in eubacteria: a new role of initiation factor 3.

Authors:  Anuradha Seshadri; Umesh Varshney
Journal:  J Biosci       Date:  2006-06       Impact factor: 1.826

8.  Specific interaction between EF-G and RRF and its implication for GTP-dependent ribosome splitting into subunits.

Authors:  Ning Gao; Andrey V Zavialov; Måns Ehrenberg; Joachim Frank
Journal:  J Mol Biol       Date:  2007-10-16       Impact factor: 5.469

Review 9.  Ribosomal translocation: one step closer to the molecular mechanism.

Authors:  Shinichiro Shoji; Sarah E Walker; Kurt Fredrick
Journal:  ACS Chem Biol       Date:  2009-02-20       Impact factor: 5.100

10.  Structural basis for hygromycin B inhibition of protein biosynthesis.

Authors:  Maria A Borovinskaya; Shinichiro Shoji; Kurt Fredrick; Jamie H D Cate
Journal:  RNA       Date:  2008-06-20       Impact factor: 4.942

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