Literature DB >> 20534490

Ribosome recycling step in yeast cytoplasmic protein synthesis is catalyzed by eEF3 and ATP.

Shinya Kurata1, Klaus H Nielsen, Sarah F Mitchell, Jon R Lorsch, Akira Kaji, Hideko Kaji.   

Abstract

After each round of protein biosynthesis, the posttermination complex (PoTC) consisting of a ribosome, mRNA, and tRNA must be disassembled into its components for a new round of translation. Here, we show that a Saccharomyces cerevisiae model PoTC was disassembled by ATP and eukaryotic elongation factor 3 (eEF3). GTP or ITP functioned with less efficiency and adenosine 5gamma'-(beta,gamma-imido)triphosphate did not function at all. The k(cat) of eEF3 was 1.12 min(-1), which is comparable to that of the in vitro initiation step. The disassembly reaction was inhibited by aminoglycosides and cycloheximide. The subunits formed from the yeast model PoTC remained separated under ionic conditions close to those existing in vivo, suggesting that they are ready to enter the initiation process. Based on our experimental techniques used in this paper, the release of mRNA and tRNA and ribosome dissociation took place simultaneously. No 40S*mRNA complex was observed, indicating that eEF3 action promotes ribosome recycling, not reinitiation.

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Year:  2010        PMID: 20534490      PMCID: PMC2890720          DOI: 10.1073/pnas.1006247107

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  56 in total

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Journal:  Nat Struct Biol       Date:  2003-05

3.  Splitting of the posttermination ribosome into subunits by the concerted action of RRF and EF-G.

Authors:  Andrey V Zavialov; Vasili V Hauryliuk; Måns Ehrenberg
Journal:  Mol Cell       Date:  2005-06-10       Impact factor: 17.970

4.  Progression of the ribosome recycling factor through the ribosome dissociates the two ribosomal subunits.

Authors:  Chandana Barat; Partha P Datta; V Samuel Raj; Manjuli R Sharma; Hideko Kaji; Akira Kaji; Rajendra K Agrawal
Journal:  Mol Cell       Date:  2007-07-20       Impact factor: 17.970

5.  eIF3a cooperates with sequences 5' of uORF1 to promote resumption of scanning by post-termination ribosomes for reinitiation on GCN4 mRNA.

Authors:  Béla Szamecz; Edit Rutkai; Lucie Cuchalová; Vanda Munzarová; Anna Herrmannová; Klaus H Nielsen; Laxminarayana Burela; Alan G Hinnebusch; Leos Valásek
Journal:  Genes Dev       Date:  2008-09-01       Impact factor: 11.361

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Authors:  A Kamath; K Chakraburtty
Journal:  J Biol Chem       Date:  1989-09-15       Impact factor: 5.157

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Authors:  R S Zitomer; J G Flaks
Journal:  J Mol Biol       Date:  1972-11-14       Impact factor: 5.469

8.  Characterization of a 40S ribosomal subunit complex in polyribosomes of Saccharomyces cerevisiae treated with cycloheximide.

Authors:  T L Helser; R A Baan; A E Dahlberg
Journal:  Mol Cell Biol       Date:  1981-01       Impact factor: 4.272

9.  Binding of cycloheximide to ribosomes from wild-type and mutant strains of Saccharomyces cerevisiae.

Authors:  W Stöcklein; W Piepersberg
Journal:  Antimicrob Agents Chemother       Date:  1980-12       Impact factor: 5.191

10.  Faithful and efficient translation of homologous and heterologous mRNAs in an mRNA-dependent cell-free system from Saccharomyces cerevisiae.

Authors:  M F Tuite; J Plesset; K Moldave; C S McLaughlin
Journal:  J Biol Chem       Date:  1980-09-25       Impact factor: 5.157

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  20 in total

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2.  The ABCs of the ribosome.

Authors:  Kurt Fredrick; Michael Ibba
Journal:  Nat Struct Mol Biol       Date:  2014-02       Impact factor: 15.369

3.  Biochemical characterization of the mouse ABCF3 protein, a partner of the flavivirus-resistance protein OAS1B.

Authors:  Elizabeth Peterson; Emma Shippee; Margo A Brinton; Parjit Kaur
Journal:  J Biol Chem       Date:  2019-08-14       Impact factor: 5.157

4.  Evidence That Antibiotics Bind to Human Mitochondrial Ribosomal RNA Has Implications for Aminoglycoside Toxicity.

Authors:  Seoyeon Hong; Kimberly A Harris; Kathryn D Fanning; Kathryn L Sarachan; Kyla M Frohlich; Paul F Agris
Journal:  J Biol Chem       Date:  2015-06-09       Impact factor: 5.157

5.  Deletion of a subgroup of ribosome-related genes minimizes hypoxia-induced changes and confers hypoxia tolerance.

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Journal:  Physiol Genomics       Date:  2011-05-17       Impact factor: 3.107

6.  Dom34:Hbs1 promotes subunit dissociation and peptidyl-tRNA drop-off to initiate no-go decay.

Authors:  Christopher J Shoemaker; Daniel E Eyler; Rachel Green
Journal:  Science       Date:  2010-10-15       Impact factor: 47.728

Review 7.  ABC-F translation factors: from antibiotic resistance to immune response.

Authors:  Corentin R Fostier; Laura Monlezun; Farès Ousalem; Shikha Singh; John F Hunt; Grégory Boël
Journal:  FEBS Lett       Date:  2020-12-04       Impact factor: 4.124

8.  On the Diversification of the Translation Apparatus across Eukaryotes.

Authors:  Greco Hernández; Christopher G Proud; Thomas Preiss; Armen Parsyan
Journal:  Comp Funct Genomics       Date:  2012-05-14

9.  Heat shock-induced accumulation of translation elongation and termination factors precedes assembly of stress granules in S. cerevisiae.

Authors:  Tomas Grousl; Pavel Ivanov; Ivana Malcova; Petr Pompach; Ivana Frydlova; Renata Slaba; Lenka Senohrabkova; Lenka Novakova; Jiri Hasek
Journal:  PLoS One       Date:  2013-02-25       Impact factor: 3.240

10.  Possible steps of complete disassembly of post-termination complex by yeast eEF3 deduced from inhibition by translocation inhibitors.

Authors:  Shinya Kurata; Ben Shen; Jun O Liu; Nono Takeuchi; Akira Kaji; Hideko Kaji
Journal:  Nucleic Acids Res       Date:  2012-10-18       Impact factor: 16.971

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