Literature DB >> 11563560

Amino acid type-selective backbone 1H-15N-correlations for Arg and Lys.

M Schubert1, H Oschkinat, P Schmieder.   

Abstract

Four novel amino acid type-selective triple resonance experiments to identify the backbone amino proton and nitrogen resonances of Arg and Lys and of their sequential neighbors in (13C,15N)-labeled proteins are presented: the R(i+1)-HSQC and R(i,i+1)-HSQC select signals originating from Arg side chains, the K(i+1)-HSQC and K(i,i+1)-HSQC select signals originating from Lys side chains. The selection is based on exploiting the characteristic chemical shifts of a pair of carbon atoms in Arg and Lys side chains using selective 90 degree pulses. The new experiments are recorded as two-dimensional 1H-15N-correlations and their performance is demonstrated with the application to a protein domain of 83 amino acids.

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Year:  2001        PMID: 11563560     DOI: 10.1023/a:1011206131623

Source DB:  PubMed          Journal:  J Biomol NMR        ISSN: 0925-2738            Impact factor:   2.835


  12 in total

1.  MUSIC in triple-resonance experiments: amino acid type-selective (1)H-(15)N correlations

Authors: 
Journal:  J Magn Reson       Date:  1999-11       Impact factor: 2.229

2.  MUSIC, selective pulses, and tuned delays: amino acid type-selective (1)H-(15)N correlations, II.

Authors:  M Schubert; H Oschkinat; P Schmieder
Journal:  J Magn Reson       Date:  2001-01       Impact factor: 2.229

Review 3.  Automated analysis of NMR assignments and structures for proteins.

Authors:  H N Moseley; G T Montelione
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Authors:  M Smalla; P Schmieder; M Kelly; A Ter Laak; G Krause; L Ball; M Wahl; P Bork; H Oschkinat
Journal:  Protein Sci       Date:  1999-10       Impact factor: 6.725

5.  Dual epitope recognition by the VASP EVH1 domain modulates polyproline ligand specificity and binding affinity.

Authors:  L J Ball; R Kühne; B Hoffmann; A Häfner; P Schmieder; R Volkmer-Engert; M Hof; M Wahl; J Schneider-Mergener; U Walter; H Oschkinat; T Jarchau
Journal:  EMBO J       Date:  2000-09-15       Impact factor: 11.598

6.  A relational database for sequence-specific protein NMR data.

Authors:  B R Seavey; E A Farr; W M Westler; J L Markley
Journal:  J Biomol NMR       Date:  1991-09       Impact factor: 2.835

7.  Evolution strategy optimization for selective pulses in NMR

Authors: 
Journal:  J Magn Reson       Date:  1998-10       Impact factor: 2.229

8.  Multiplicity-Selective Coherence Transfer Steps for the Design of Amino Acid-Selective Experiments-A Triple-Resonance Experiment Selective for Asn and Gln

Authors: 
Journal:  J Magn Reson       Date:  1998-04       Impact factor: 2.229

9.  Automated analysis of protein NMR assignments using methods from artificial intelligence.

Authors:  D E Zimmerman; C A Kulikowski; Y Huang; W Feng; M Tashiro; S Shimotakahara; C Chien; R Powers; G T Montelione
Journal:  J Mol Biol       Date:  1997-06-20       Impact factor: 5.469

10.  Amino acid type determination in the sequential assignment procedure of uniformly 13C/15N-enriched proteins.

Authors:  S Grzesiek; A Bax
Journal:  J Biomol NMR       Date:  1993-03       Impact factor: 2.835

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  11 in total

1.  MONTE: An automated Monte Carlo based approach to nuclear magnetic resonance assignment of proteins.

Authors:  T Kevin Hitchens; Jonathan A Lukin; Yiping Zhan; Scott A McCallum; Gordon S Rule
Journal:  J Biomol NMR       Date:  2003-01       Impact factor: 2.835

2.  IBIS--a tool for automated sequential assignment of protein spectra from triple resonance experiments.

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3.  A modified strategy for sequence specific assignment of protein NMR spectra based on amino acid type selective experiments.

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Journal:  J Biomol NMR       Date:  2005-02       Impact factor: 2.835

4.  Amino-acid type identification in 15N-HSQC spectra by combinatorial selective 15N-labelling.

Authors:  Peter S C Wu; Kiyoshi Ozawa; Slobodan Jergic; Xun-Cheng Su; Nicholas E Dixon; Gottfried Otting
Journal:  J Biomol NMR       Date:  2006-01       Impact factor: 2.835

5.  Human protein N-terminal acetyltransferase hNaa50p (hNAT5/hSAN) follows ordered sequential catalytic mechanism: combined kinetic and NMR study.

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Journal:  J Biol Chem       Date:  2012-02-06       Impact factor: 5.157

6.  New amino acid residue type identification experiments valid for protonated and deuterated proteins.

Authors:  David Pantoja-Uceda; Jorge Santoro
Journal:  J Biomol NMR       Date:  2012-09-04       Impact factor: 2.835

7.  F 1 F 2-selective NMR spectroscopy.

Authors:  Erik Walinda; Daichi Morimoto; Masahiro Shirakawa; Kenji Sugase
Journal:  J Biomol NMR       Date:  2017-05-04       Impact factor: 2.835

8.  1H, 15N, and 13C resonance assignments and secondary structure of the Ssh10b from hyperthermophilic archaeon Sulfolobus shibatae.

Authors:  Yufeng Tong; Qiu Cui; Yingang Feng; Li Huang; Jinfeng Wang
Journal:  J Biomol NMR       Date:  2002-04       Impact factor: 2.835

9.  Amino acid selective unlabeling for sequence specific resonance assignments in proteins.

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Journal:  J Biomol NMR       Date:  2010-12-09       Impact factor: 2.835

Review 10.  13C Direct Detected NMR for Challenging Systems.

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Journal:  Chem Rev       Date:  2022-01-13       Impact factor: 72.087

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