Literature DB >> 10508776

Automated analysis of NMR assignments and structures for proteins.

H N Moseley1, G T Montelione.   

Abstract

Recent developments in protein NMR technology have provided spectral data that are highly amenable to analysis by advanced computer software systems. Specific data collection strategies, coupled with these computer programs, allow automated analysis of extensive backbone and sidechain resonance assignments and three-dimensional structures for proteins of 50 to 200 amino acids.

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Year:  1999        PMID： 10508776     DOI： 10.1016/s0959-440x(99)00019-6

Source DB:  PubMed          Journal:  Curr Opin Struct Biol        ISSN： 0959-440X            Impact factor:   6.809


  63 in total

1.  Variability in automated assignment of NOESY spectra and three-dimensional structure determination: a test case on three small disulfide-bonded proteins.

Authors:  P Savarin; S Zinn-Justin; B Gilquin
Journal:  J Biomol NMR       Date:  2001-01       Impact factor: 2.835

2.  Sequence-specific NMR assignment of proteins by global fragment mapping with the program MAPPER.

Authors:  P Güntert; M Salzmann; D Braun; K Wüthrich
Journal:  J Biomol NMR       Date:  2000-10       Impact factor: 2.835

Review 3.  Structural genomics: an approach to the protein folding problem.

Authors:  G T Montelione
Journal:  Proc Natl Acad Sci U S A       Date:  2001-11-20       Impact factor: 11.205

4.  Protein backbone structure determination using only residual dipolar couplings from one ordering medium.

Authors:  M Andrec; P Du; R M Levy
Journal:  J Biomol NMR       Date:  2001-12       Impact factor: 2.835

5.  Influence of the completeness of chemical shift assignments on NMR structures obtained with automated NOE assignment.

Authors:  JunGoo Jee; Peter Güntert
Journal:  J Struct Funct Genomics       Date:  2003

6.  Smartnotebook: a semi-automated approach to protein sequential NMR resonance assignments.

Authors:  Carolyn M Slupsky; Robert F Boyko; Valerie K Booth; Brian D Sykes
Journal:  J Biomol NMR       Date:  2003-12       Impact factor: 2.835

7.  Rapid protein fold determination using unassigned NMR data.

Authors:  Jens Meiler; David Baker
Journal:  Proc Natl Acad Sci U S A       Date:  2003-12-10       Impact factor: 11.205

8.  Reduced-dimensionality NMR spectroscopy for high-throughput protein resonance assignment.

Authors:  Thomas Szyperski; Deok C Yeh; Dinesh K Sukumaran; Hunter N B Moseley; Gaetano T Montelione
Journal:  Proc Natl Acad Sci U S A       Date:  2002-06-11       Impact factor: 11.205

9.  Protein sequential resonance assignments by combinatorial enumeration using 13C alpha chemical shifts and their (i, i-1) sequential connectivities.

Authors:  Michael Andrec; Ronald M Levy
Journal:  J Biomol NMR       Date:  2002-08       Impact factor: 2.835

10.  RefDB: a database of uniformly referenced protein chemical shifts.

Authors:  Haiyan Zhang; Stephen Neal; David S Wishart
Journal:  J Biomol NMR       Date:  2003-03       Impact factor: 2.835
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