Literature DB >> 10733994

Protein-bound water molecule counting by resolution of (1)H spin-lattice relaxation mechanisms.

S Kiihne1, R G Bryant.   

Abstract

Water proton spin-lattice relaxation is studied in dilute solutions of bovine serum albumin as a function of magnetic field strength, oxygen concentration, and solvent deuteration. In contrast to previous studies conducted at high protein concentrations, the observed relaxation dispersion is accurately Lorentzian with an effective correlation time of 41 +/- 3 ns when measured at low proton and low protein concentrations to minimize protein aggregation. Elimination of oxygen flattens the relaxation dispersion profile above the rotational inflection frequency, nearly eliminating the high field tail previously attributed to a distribution of exchange times for either whole water molecules or individual protons at the protein-water interface. The small high-field dispersion that remains is attributed to motion of the bound water molecules on the protein or to internal protein motions on a time scale of order one ns. Measurements as a function of isotope composition permit separation of intramolecular and intermolecular relaxation contributions. The magnitude of the intramolecular proton-proton relaxation rate constant is interpreted in terms of 25 +/- 4 water molecules that are bound rigidly to the protein for a time long compared with the rotational correlation time of 42 ns. This number of bound water molecules neglects the possibility of local motions of the water in the binding site; inclusion of these effects may increase the number of bound water molecules by 50%.

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Year:  2000        PMID: 10733994      PMCID: PMC1300808          DOI: 10.1016/S0006-3495(00)76763-4

Source DB:  PubMed          Journal:  Biophys J        ISSN: 0006-3495            Impact factor:   4.033


  20 in total

1.  Hydration of denatured and molten globule proteins.

Authors:  V P Denisov; B H Jonsson; B Halle
Journal:  Nat Struct Biol       Date:  1999-03

2.  Fluctuations, exchange processes, and water diffusion in aqueous protein systems: A study of bovine serum albumin by diverse NMR techniques.

Authors:  R Kimmich; T Gneiting; K Kotitschke; G Schnur
Journal:  Biophys J       Date:  1990-11       Impact factor: 4.033

3.  Model-free analysis of stretched relaxation dispersions.

Authors:  B Halle; H Jóhannesson; K Venu
Journal:  J Magn Reson       Date:  1998-11       Impact factor: 2.229

4.  Using buried water molecules to explore the energy landscape of proteins.

Authors:  V P Denisov; J Peters; H D Hörlein; B Halle
Journal:  Nat Struct Biol       Date:  1996-06

5.  Nuclear magnetic relaxation dispersion in protein solutions. I. Apotransferrin.

Authors:  S H Koenig; W E Schillinger
Journal:  J Biol Chem       Date:  1969-06-25       Impact factor: 5.157

6.  A unified view of relaxation in protein solutions and tissue, including hydration and magnetization transfer.

Authors:  S H Koenig; R D Brown; R Ugolini
Journal:  Magn Reson Med       Date:  1993-01       Impact factor: 4.668

7.  Classes of hydration sites at protein-water interfaces: the source of contrast in magnetic resonance imaging.

Authors:  S H Koenig
Journal:  Biophys J       Date:  1995-08       Impact factor: 4.033

8.  Metal-ligand complexes as a new class of long-lived fluorophores for protein hydrodynamics.

Authors:  E Terpetschnig; H Szmacinski; H Malak; J R Lakowicz
Journal:  Biophys J       Date:  1995-01       Impact factor: 4.033

9.  Thermal denaturation of ribonuclease A characterized by water 17O and 2H magnetic relaxation dispersion.

Authors:  V P Denisov; B Halle
Journal:  Biochemistry       Date:  1998-06-30       Impact factor: 3.162

10.  Protein hydration dynamics in aqueous solution: a comparison of bovine pancreatic trypsin inhibitor and ubiquitin by oxygen-17 spin relaxation dispersion.

Authors:  V P Denisov; B Halle
Journal:  J Mol Biol       Date:  1995-02-03       Impact factor: 5.469

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  14 in total

1.  Protein reorientation and bound water molecules measured by 1H magnetic spin-lattice relaxation.

Authors:  Alexandra Van-Quynh; Steven Willson; Robert G Bryant
Journal:  Biophys J       Date:  2003-01       Impact factor: 4.033

2.  Hemoglobin senses body temperature.

Authors:  G M Artmann; Ilya Digel; K F Zerlin; Ch Maggakis-Kelemen; Pt Linder; D Porst; P Kayser; A M Stadler; G Dikta; A Temiz Artmann
Journal:  Eur Biophys J       Date:  2009-02-24       Impact factor: 1.733

3.  Practical considerations over spectral quality in solid state NMR spectroscopy of soluble proteins.

Authors:  Marco Fragai; Claudio Luchinat; Giacomo Parigi; Enrico Ravera
Journal:  J Biomol NMR       Date:  2013-08-30       Impact factor: 2.835

4.  Reconstruction of the environmental evolution of a Sicilian saltmarsh (Italy).

Authors:  Antonella Maccotta; Claudio De Pasquale; Antonio Caruso; Claudia Cosentino; Giuseppe Alonzo; Pellegrino Conte
Journal:  Environ Sci Pollut Res Int       Date:  2013-01-10       Impact factor: 4.223

5.  Structural and dynamical examination of the low-temperature glass transition in serum albumin.

Authors:  Yanina A Goddard; Jean-Pierre Korb; Robert G Bryant
Journal:  Biophys J       Date:  2006-08-25       Impact factor: 4.033

6.  Site-specific hydration dynamics in the nonpolar core of a molten globule by dynamic nuclear polarization of water.

Authors:  Brandon D Armstrong; Jennifer Choi; Carlos López; Darryl A Wesener; Wayne Hubbell; Silvia Cavagnero; Songi Han
Journal:  J Am Chem Soc       Date:  2011-03-28       Impact factor: 15.419

7.  Characterization of white matter degeneration in elderly subjects by magnetic resonance diffusion and FLAIR imaging correlation.

Authors:  Wang Zhan; Yu Zhang; Susanne G Mueller; Peter Lorenzen; Stathis Hadjidemetriou; Norbert Schuff; Michael W Weiner
Journal:  Neuroimage       Date:  2009-02-20       Impact factor: 6.556

8.  Water and backbone dynamics in a hydrated protein.

Authors:  Galina Diakova; Yanina A Goddard; Jean-Pierre Korb; Robert G Bryant
Journal:  Biophys J       Date:  2010-01-06       Impact factor: 4.033

9.  A peptide's perspective of water dynamics.

Authors:  Ayanjeet Ghosh; Robin M Hochstrasser
Journal:  Chem Phys       Date:  2011-08-11       Impact factor: 2.348

10.  High frequency dynamics in hemoglobin measured by magnetic relaxation dispersion.

Authors:  Ken Victor; Alexandra Van-Quynh; Robert G Bryant
Journal:  Biophys J       Date:  2004-10-08       Impact factor: 4.033

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