Literature DB >> 12524308

Protein reorientation and bound water molecules measured by 1H magnetic spin-lattice relaxation.

Alexandra Van-Quynh1, Steven Willson, Robert G Bryant.   

Abstract

The water-proton spin-lattice relaxation rate constant, 1/T(1), was measured as a function of magnetic field strength for several dilute protein solutions. By separating the intermolecular contributions from the intramolecular contributions to the water-proton spin-lattice relaxation, the number of water molecules that bind to the protein for a time long compared with the rotational correlation time may be measured. We find a good correlation between the number of long-lived water molecules and the predictions based on available free volume in the proteins studied. The rotational correlation times of these proteins are larger than predicted by the Stokes-Einstein-Debye (SED) model for a sphere reorienting in a viscous liquid. The discrepancy between experiment and theory is usually attributed to hydration effects increasing the effective radius of the particle. However, the average lifetime of water molecules at the protein interface is far too short to justify such a picture. We suggest that surface roughness may be responsible for the retardation of rotational mobility and find that the SED model provides a reasonable representation of experiment if the radius assumed for the reorienting particle is the arithmetic mean of the crystallographic packing radius and the radius deduced from the effective surface area of the protein.

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Year:  2003        PMID: 12524308      PMCID: PMC1302636          DOI: 10.1016/S0006-3495(03)74875-9

Source DB:  PubMed          Journal:  Biophys J        ISSN: 0006-3495            Impact factor:   4.033


  17 in total

1.  High-resolution magnetic relaxation dispersion measurements of solute spin probes using a dual-magnet system.

Authors:  S Wagner; T R Dinesen; T Rayner; R G Bryant
Journal:  J Magn Reson       Date:  1999-09       Impact factor: 2.229

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Journal:  Faraday Discuss       Date:  1996       Impact factor: 4.008

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Authors:  S Kiihne; R G Bryant
Journal:  Biophys J       Date:  2000-04       Impact factor: 4.033

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Journal:  J Mol Biol       Date:  1970-08       Impact factor: 5.469

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Authors:  S H Koenig; W E Schillinger
Journal:  J Biol Chem       Date:  1969-06-25       Impact factor: 5.157

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Journal:  J Mol Biol       Date:  1971-02-14       Impact factor: 5.469

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Authors:  S H Koenig
Journal:  Biophys J       Date:  1995-08       Impact factor: 4.033

8.  Residence times of the buried water molecules in bovine pancreatic trypsin inhibitor and its G36S mutant.

Authors:  V P Denisov; B Halle; J Peters; H D Hörlein
Journal:  Biochemistry       Date:  1995-07-18       Impact factor: 3.162

9.  Thermal denaturation of ribonuclease A characterized by water 17O and 2H magnetic relaxation dispersion.

Authors:  V P Denisov; B Halle
Journal:  Biochemistry       Date:  1998-06-30       Impact factor: 3.162

10.  Protein-water interaction studied by solvent 1H, 2H, and 17O magnetic relaxation.

Authors:  S H Koenig; K Hallenga; M Shporer
Journal:  Proc Natl Acad Sci U S A       Date:  1975-07       Impact factor: 11.205

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  10 in total

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Authors:  Jan Spitzer
Journal:  Microbiol Mol Biol Rev       Date:  2011-09       Impact factor: 11.056

Review 2.  NMR techniques in studying water in biotechnological systems.

Authors:  Victor V Rodin
Journal:  Biophys Rev       Date:  2020-06-15

3.  Water-proton-spin-lattice-relaxation dispersion of paramagnetic protein solutions.

Authors:  Galina Diakova; Yanina Goddard; Jean-Pierre Korb; Robert G Bryant
Journal:  J Magn Reson       Date:  2010-11-10       Impact factor: 2.229

4.  Phospholipid bilayer surface configuration probed quantitatively by (31)P field-cycling NMR.

Authors:  Mary F Roberts; Alfred G Redfield
Journal:  Proc Natl Acad Sci U S A       Date:  2004-11-29       Impact factor: 11.205

5.  High frequency dynamics in hemoglobin measured by magnetic relaxation dispersion.

Authors:  Ken Victor; Alexandra Van-Quynh; Robert G Bryant
Journal:  Biophys J       Date:  2004-10-08       Impact factor: 4.033

6.  Water molecule contributions to proton spin-lattice relaxation in rotationally immobilized proteins.

Authors:  Yanina A Goddard; Jean-Pierre Korb; Robert G Bryant
Journal:  J Magn Reson       Date:  2009-04-08       Impact factor: 2.229

7.  Water proton spin-lattice relaxation time during the apoptotic process in ultraviolet-irradiated murine erythroleukemia cells.

Authors:  Takeo Yamaguchi; Takayuki Koga; Satoshi Katsuki
Journal:  J Physiol Sci       Date:  2009-01-22       Impact factor: 2.781

8.  Oligomeric state of lipocalin-1 (LCN1) by multiangle laser light scattering and fluorescence anisotropy decay.

Authors:  Oktay K Gasymov; Adil R Abduragimov; Petra Merschak; Bernhard Redl; Ben J Glasgow
Journal:  Biochim Biophys Acta       Date:  2007-08-14

9.  Water accessibility, aggregation, and motional features of polysaccharide-protein conjugate vaccines.

Authors:  Francesco Berti; Paolo Costantino; Marco Fragai; Claudio Luchinat
Journal:  Biophys J       Date:  2004-01       Impact factor: 4.033

10.  Antibiotic binding of STY3178, a yfdX protein from Salmonella Typhi.

Authors:  Paramita Saha; Camelia Manna; Santasabuj Das; Mahua Ghosh
Journal:  Sci Rep       Date:  2016-02-19       Impact factor: 4.379

  10 in total

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