Literature DB >> 10618382

Pulling a single chromatin fiber reveals the forces that maintain its higher-order structure.

Y Cui1, C Bustamante.   

Abstract

Single chicken erythrocyte chromatin fibers were stretched and released at room temperature with force-measuring laser tweezers. In low ionic strength, the stretch-release curves reveal a process of continuous deformation with little or no internucleosomal attraction. A persistence length of 30 nm and a stretch modulus of approximately 5 pN is determined for the fibers. At forces of 20 pN and higher, the fibers are modified irreversibly, probably through the mechanical removal of the histone cores from native chromatin. In 40-150 mM NaCl, a distinctive condensation-decondensation transition appears between 5 and 6 pN, corresponding to an internucleosomal attraction energy of approximately 2.0 kcal/mol per nucleosome. Thus, in physiological ionic strength the fibers possess a dynamic structure in which the fiber locally interconverting between "open" and "closed" states because of thermal fluctuations.

Entities:  

Mesh:

Substances:

Year:  2000        PMID: 10618382      PMCID: PMC26627          DOI: 10.1073/pnas.97.1.127

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  32 in total

Review 1.  What determines the folding of the chromatin fiber?

Authors:  K van Holde; J Zlatanova
Journal:  Proc Natl Acad Sci U S A       Date:  1996-10-01       Impact factor: 11.205

Review 2.  Electron microscopic imaging of chromatin with nucleosome resolution.

Authors:  C L Woodcock; R A Horowitz
Journal:  Methods Cell Biol       Date:  1998       Impact factor: 1.441

3.  Driving proteins off DNA using applied tension.

Authors:  J F Marko; E D Siggia
Journal:  Biophys J       Date:  1997-10       Impact factor: 4.033

4.  The molecular elasticity of the extracellular matrix protein tenascin.

Authors:  A F Oberhauser; P E Marszalek; H P Erickson; J M Fernandez
Journal:  Nature       Date:  1998-05-14       Impact factor: 49.962

5.  Behavior of supercoiled DNA.

Authors:  T R Strick; J F Allemand; D Bensimon; V Croquette
Journal:  Biophys J       Date:  1998-04       Impact factor: 4.033

6.  Visualization and analysis of chromatin by scanning force microscopy.

Authors:  C Bustamante; G Zuccheri; S H Leuba; G Yang; B Samori
Journal:  Methods       Date:  1997-05       Impact factor: 3.608

7.  Crystal structure of the nucleosome core particle at 2.8 A resolution.

Authors:  K Luger; A W Mäder; R K Richmond; D F Sargent; T J Richmond
Journal:  Nature       Date:  1997-09-18       Impact factor: 49.962

8.  Reversible unfolding of individual titin immunoglobulin domains by AFM.

Authors:  M Rief; M Gautel; F Oesterhelt; J M Fernandez; H E Gaub
Journal:  Science       Date:  1997-05-16       Impact factor: 47.728

9.  Single polymer dynamics in an elongational flow.

Authors:  T T Perkins; D E Smith; S Chu
Journal:  Science       Date:  1997-06-27       Impact factor: 47.728

10.  Elasticity and unfolding of single molecules of the giant muscle protein titin.

Authors:  L Tskhovrebova; J Trinick; J A Sleep; R M Simmons
Journal:  Nature       Date:  1997-05-15       Impact factor: 49.962

View more
  160 in total

1.  DNA folding: structural and mechanical properties of the two-angle model for chromatin.

Authors:  H Schiessel; W M Gelbart; R Bruinsma
Journal:  Biophys J       Date:  2001-04       Impact factor: 4.033

2.  Fast kinetics of chromatin assembly revealed by single-molecule videomicroscopy and scanning force microscopy.

Authors:  B Ladoux; J P Quivy; P Doyle; O du Roure; G Almouzni; J L Viovy
Journal:  Proc Natl Acad Sci U S A       Date:  2000-12-19       Impact factor: 11.205

3.  Dicentric chromosome stretching during anaphase reveals roles of Sir2/Ku in chromatin compaction in budding yeast.

Authors:  D A Thrower; K Bloom
Journal:  Mol Biol Cell       Date:  2001-09       Impact factor: 4.138

4.  Mechanical disruption of individual nucleosomes reveals a reversible multistage release of DNA.

Authors:  Brent D Brower-Toland; Corey L Smith; Richard C Yeh; John T Lis; Craig L Peterson; Michelle D Wang
Journal:  Proc Natl Acad Sci U S A       Date:  2002-02-19       Impact factor: 11.205

5.  New insights into unwrapping DNA from the nucleosome from a single-molecule optical tweezers method.

Authors:  Jeffrey J Hayes; Jeffrey C Hansen
Journal:  Proc Natl Acad Sci U S A       Date:  2002-02-19       Impact factor: 11.205

6.  Bilayers of nucleosome core particles.

Authors:  A Leforestier; J Dubochet; F Livolant
Journal:  Biophys J       Date:  2001-10       Impact factor: 4.033

7.  Computer simulation of the 30-nanometer chromatin fiber.

Authors:  Gero Wedemann; Jörg Langowski
Journal:  Biophys J       Date:  2002-06       Impact factor: 4.033

Review 8.  Optical tweezers stretching of chromatin.

Authors:  Lisa H Pope; Martin L Bennink; Jan Greve
Journal:  J Muscle Res Cell Motil       Date:  2002       Impact factor: 2.698

Review 9.  Micromechanical studies of mitotic chromosomes.

Authors:  M G Poirier; J F Marko
Journal:  J Muscle Res Cell Motil       Date:  2002       Impact factor: 2.698

10.  Compaction of Single-Molecule Megabase-Long Chromatin under the Influence of Macromolecular Crowding.

Authors:  Anatoly Zinchenko; Nikolay V Berezhnoy; Qinming Chen; Lars Nordenskiöld
Journal:  Biophys J       Date:  2018-05-03       Impact factor: 4.033

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.