Literature DB >> 12785093

Optical tweezers stretching of chromatin.

Lisa H Pope1, Martin L Bennink, Jan Greve.   

Abstract

Recently significant success has emerged from exciting research involving chromatin stretching using optical tweezers. These experiments, in which a single chromatin fibre is attached by one end to a micron-sized bead held in an optical trap and to a solid surface or second bead via the other end, allows manipulation and force detection at a single-molecule level. Through force-induced stretching of chromatin, mechanical properties, specific intermolecular bond strengths and DNA-protein association and dissociation kinetics have been determined. These studies will be extremely fruitful in terms of understanding the function of chromatin structure and its dynamics within the cell.

Mesh:

Substances:

Year:  2002        PMID: 12785093     DOI: 10.1023/a:1023450204528

Source DB:  PubMed          Journal:  J Muscle Res Cell Motil        ISSN: 0142-4319            Impact factor:   2.698


  57 in total

1.  Reversible and irreversible unfolding of mitotic newt chromosomes by applied force.

Authors:  M Poirier; S Eroglu; D Chatenay; J F Marko
Journal:  Mol Biol Cell       Date:  2000-01       Impact factor: 4.138

Review 2.  Emerging connections between DNA methylation and histone acetylation.

Authors:  J R Dobosy; E U Selker
Journal:  Cell Mol Life Sci       Date:  2001-05       Impact factor: 9.261

3.  Unfolding individual nucleosomes by stretching single chromatin fibers with optical tweezers.

Authors:  M L Bennink; S H Leuba; G H Leno; J Zlatanova; B G de Grooth; J Greve
Journal:  Nat Struct Biol       Date:  2001-07

4.  Contributions of linker histones and histone H3 to chromatin structure: scanning force microscopy studies on trypsinized fibers.

Authors:  S H Leuba; C Bustamante; J Zlatanova; K van Holde
Journal:  Biophys J       Date:  1998-06       Impact factor: 4.033

5.  Crystal structure of the nucleosome core particle at 2.8 A resolution.

Authors:  K Luger; A W Mäder; R K Richmond; D F Sargent; T J Richmond
Journal:  Nature       Date:  1997-09-18       Impact factor: 49.962

6.  DNA folding by histones: the kinetics of chromatin core particle reassembly and the interaction of nucleosomes with histones.

Authors:  A Stein
Journal:  J Mol Biol       Date:  1979-05-15       Impact factor: 5.469

7.  Mechanism of protein access to specific DNA sequences in chromatin: a dynamic equilibrium model for gene regulation.

Authors:  K J Polach; J Widom
Journal:  J Mol Biol       Date:  1995-11-24       Impact factor: 5.469

8.  Structure of the 300A chromatin filament: X-ray diffraction from oriented samples.

Authors:  J Widom; A Klug
Journal:  Cell       Date:  1985-11       Impact factor: 41.582

9.  Role of histone pairs H2A,H2B and H3,H4 in the self-assembly of nucleosome core particles.

Authors:  J R Daban; C R Cantor
Journal:  J Mol Biol       Date:  1982-04-25       Impact factor: 5.469

10.  Assembly of SV40 chromatin in a cell-free system from Xenopus eggs.

Authors:  R A Laskey; A D Mills; N R Morris
Journal:  Cell       Date:  1977-02       Impact factor: 41.582

View more
  8 in total

1.  Single chromatin fiber stretching reveals physically distinct populations of disassembly events.

Authors:  L H Pope; M L Bennink; K A van Leijenhorst-Groener; D Nikova; J Greve; J F Marko
Journal:  Biophys J       Date:  2005-02-04       Impact factor: 4.033

2.  Micro magnetic tweezers for nanomanipulation inside live cells.

Authors:  Anthony H B de Vries; Bea E Krenn; Roel van Driel; Johannes S Kanger
Journal:  Biophys J       Date:  2004-11-19       Impact factor: 4.033

3.  Optical trapping.

Authors:  Keir C Neuman; Steven M Block
Journal:  Rev Sci Instrum       Date:  2004-09       Impact factor: 1.523

4.  Micromanipulation studies of chromatin fibers in Xenopus egg extracts reveal ATP-dependent chromatin assembly dynamics.

Authors:  Jie Yan; Thomas J Maresca; Dunja Skoko; Christian D Adams; Botao Xiao; Morten O Christensen; Rebecca Heald; John F Marko
Journal:  Mol Biol Cell       Date:  2006-11-15       Impact factor: 4.138

5.  Unwinding and rewinding the nucleosome inner turn: force dependence of the kinetic rate constants.

Authors:  S G J Mochrie; A H Mack; D J Schlingman; R Collins; M Kamenetska; L Regan
Journal:  Phys Rev E Stat Nonlin Soft Matter Phys       Date:  2013-01-17

Review 6.  Chromatin fiber dynamics under tension and torsion.

Authors:  Christophe Lavelle; Jean-Marc Victor; Jordanka Zlatanova
Journal:  Int J Mol Sci       Date:  2010-04-12       Impact factor: 5.923

Review 7.  Advances in Chromatin and Chromosome Research: Perspectives from Multiple Fields.

Authors:  Andrews Akwasi Agbleke; Assaf Amitai; Jason D Buenrostro; Aditi Chakrabarti; Lingluo Chu; Anders S Hansen; Kristen M Koenig; Ajay S Labade; Sirui Liu; Tadasu Nozaki; Sergey Ovchinnikov; Andrew Seeber; Haitham A Shaban; Jan-Hendrik Spille; Andrew D Stephens; Jun-Han Su; Dushan Wadduwage
Journal:  Mol Cell       Date:  2020-08-07       Impact factor: 17.970

8.  Histone H1 compacts DNA under force and during chromatin assembly.

Authors:  Botao Xiao; Benjamin S Freedman; Kelly E Miller; Rebecca Heald; John F Marko
Journal:  Mol Biol Cell       Date:  2012-10-24       Impact factor: 4.138

  8 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.