Literature DB >> 9197259

Single polymer dynamics in an elongational flow.

T T Perkins1, D E Smith, S Chu.   

Abstract

The stretching of individual polymers in a spatially homogeneous velocity gradient was observed through use of fluorescently labeled DNA molecules. The probability distribution of molecular extension was determined as a function of time and strain rate. Although some molecules reached steady state, the average extension did not, even after a approximately 300-fold distortion of the underlying fluid element. At the highest strain rates, distinct conformational shapes with differing dynamics were observed. There was considerable variation in the onset of stretching, and chains with a dumbbell shape stretched more rapidly than folded ones. As the strain rate was increased, chains did not deform with the fluid element. The steady-state extension can be described by a model consisting of two beads connected by a spring representing the entropic elasticity of a worm-like chain, but the average dynamics cannot.

Entities:  

Mesh:

Substances:

Year:  1997        PMID: 9197259     DOI: 10.1126/science.276.5321.2016

Source DB:  PubMed          Journal:  Science        ISSN: 0036-8075            Impact factor:   47.728


  85 in total

1.  Ligand-induced conformational changes observed in single RNA molecules.

Authors:  T Ha; X Zhuang; H D Kim; J W Orr; J R Williamson; S Chu
Journal:  Proc Natl Acad Sci U S A       Date:  1999-08-03       Impact factor: 11.205

2.  Pulling a single chromatin fiber reveals the forces that maintain its higher-order structure.

Authors:  Y Cui; C Bustamante
Journal:  Proc Natl Acad Sci U S A       Date:  2000-01-04       Impact factor: 11.205

3.  Fast kinetics of chromatin assembly revealed by single-molecule videomicroscopy and scanning force microscopy.

Authors:  B Ladoux; J P Quivy; P Doyle; O du Roure; G Almouzni; J L Viovy
Journal:  Proc Natl Acad Sci U S A       Date:  2000-12-19       Impact factor: 11.205

4.  An integrated laser trap/flow control video microscope for the study of single biomolecules.

Authors:  G J Wuite; R J Davenport; A Rappaport; C Bustamante
Journal:  Biophys J       Date:  2000-08       Impact factor: 4.033

5.  Stretching single-domain proteins: phase diagram and kinetics of force-induced unfolding.

Authors:  D K Klimov; D Thirumalai
Journal:  Proc Natl Acad Sci U S A       Date:  1999-05-25       Impact factor: 11.205

6.  Peptide nucleic acids as tools for single-molecule sequence detection and manipulation.

Authors:  Hagar Zohar; Craig L Hetherington; Carlos Bustamante; Susan J Muller
Journal:  Nano Lett       Date:  2010-11-10       Impact factor: 11.189

Review 7.  Mechanics and imaging of single DNA molecules.

Authors:  M Hegner; W Grange
Journal:  J Muscle Res Cell Motil       Date:  2002       Impact factor: 2.698

8.  Electrokinetic stretching of tethered DNA.

Authors:  Sean Ferree; Harvey W Blanch
Journal:  Biophys J       Date:  2003-10       Impact factor: 4.033

9.  Calculation of the solution properties of flexible macromolecules: methods and applications.

Authors:  J García de la Torre; H E Pérez Sánchez; A Ortega; J G Hernández; M X Fernandes; F G Díaz; M C López Martínez
Journal:  Eur Biophys J       Date:  2003-04-16       Impact factor: 1.733

10.  DNA mapping using microfluidic stretching and single-molecule detection of fluorescent site-specific tags.

Authors:  Eugene Y Chan; Nuno M Goncalves; Rebecca A Haeusler; Amie J Hatch; Jonathan W Larson; Anthony M Maletta; Gregory R Yantz; Eugene D Carstea; Martin Fuchs; Gordon G Wong; Steven R Gullans; Rudolf Gilmanshin
Journal:  Genome Res       Date:  2004-06       Impact factor: 9.043

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.