Literature DB >> 10580476

A tiny RNA that catalyzes both aminoacyl-RNA and peptidyl-RNA synthesis.

M Illangasekare1, M Yarus.   

Abstract

A 29-nt RNA catalyst successively forms the aminoacyl ester phe-RNA, and then peptidyl-RNA (phe-phe-RNA), given phenylalanine adenylate (phe-AMP) as substrate. Catalysis of two related reactions at similar rates supports the argument that RNA catalysts would evolve as groups with similar mechanisms. In particular, successive aminoacyl- and peptidyl-RNA synthesis by one RNA suggests that uncoded but RNA-catalyzed peptide synthesis would evolve before the synthesis of coded peptides.

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Year:  1999        PMID: 10580476      PMCID: PMC1369869          DOI: 10.1017/s1355838299991264

Source DB:  PubMed          Journal:  RNA        ISSN: 1355-8382            Impact factor:   4.942


  12 in total

Review 1.  Boundaries for an RNA world.

Authors:  M Yarus
Journal:  Curr Opin Chem Biol       Date:  1999-06       Impact factor: 8.822

2.  Ribozyme-catalysed amino-acid transfer reactions.

Authors:  P A Lohse; J W Szostak
Journal:  Nature       Date:  1996-05-30       Impact factor: 49.962

3.  Affinity selection-amplification from randomized ribooligonucleotide pools.

Authors:  J Ciesiolka; M Illangasekare; I Majerfeld; T Nickles; M Welch; M Yarus; S Zinnen
Journal:  Methods Enzymol       Date:  1996       Impact factor: 1.600

Review 4.  The origin of polynucleotide-directed protein synthesis.

Authors:  L E Orgel
Journal:  J Mol Evol       Date:  1989-12       Impact factor: 2.395

5.  Small-molecule-substrate interactions with a self-aminoacylating ribozyme.

Authors:  M Illangasekare; M Yarus
Journal:  J Mol Biol       Date:  1997-05-09       Impact factor: 5.469

6.  Cupric ion catalysis in hydrolysis of aminoacyl-tRNA.

Authors:  P Schofield; P C Zamecnik
Journal:  Biochim Biophys Acta       Date:  1968-02-26

7.  Essential structures of a self-aminoacylating RNA.

Authors:  M Illangasekare; O Kovalchuke; M Yarus
Journal:  J Mol Biol       Date:  1997-12-12       Impact factor: 5.469

8.  The general synthetic route to amino acid esters of nucleotides and nucleoside-5'-triphosphates and some properties of these compounds.

Authors:  B P Gottikh; A A Krayevsky; N B Tarussova; P P Purygin; T L Tsilevich
Journal:  Tetrahedron       Date:  1970-09       Impact factor: 2.457

9.  Dipeptide synthesis catalyzed by aminoacyl-tRNA synthetases from Bacillus stearothermophilus.

Authors:  H Nakajima; S Kitabatake; R Tsurutani; K Yamamoto; I Tomioka; K Imahori
Journal:  Int J Pept Protein Res       Date:  1986-08

10.  The formation of dipeptides from amino acids and the 2'(3')-glycyl ester of an adenylate.

Authors:  A L Weber; L E Orgel
Journal:  J Mol Evol       Date:  1979-10       Impact factor: 2.395

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  32 in total

Review 1.  The G x U wobble base pair. A fundamental building block of RNA structure crucial to RNA function in diverse biological systems.

Authors:  G Varani; W H McClain
Journal:  EMBO Rep       Date:  2000-07       Impact factor: 8.807

Review 2.  The renaissance of aminoacyl-tRNA synthesis.

Authors:  M Ibba; D Söll
Journal:  EMBO Rep       Date:  2001-05       Impact factor: 8.807

3.  Aptamer database.

Authors:  Jennifer F Lee; Jay R Hesselberth; Lauren Ancel Meyers; Andrew D Ellington
Journal:  Nucleic Acids Res       Date:  2004-01-01       Impact factor: 16.971

4.  Finding specific RNA motifs: function in a zeptomole world?

Authors:  Rob Knight; Michael Yarus
Journal:  RNA       Date:  2003-02       Impact factor: 4.942

5.  RNA ligation and the origin of tRNA.

Authors:  Uma Nagaswamy; George E Fox
Journal:  Orig Life Evol Biosph       Date:  2003-04       Impact factor: 1.950

6.  The meaning of a minuscule ribozyme.

Authors:  Michael Yarus
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2011-10-27       Impact factor: 6.237

7.  The plausibility of RNA-templated peptides: simultaneous RNA affinity for adjacent peptide side chains.

Authors:  Rebecca M Turk-Macleod; Deepa Puthenvedu; Irene Majerfeld; Michael Yarus
Journal:  J Mol Evol       Date:  2012-04-27       Impact factor: 2.395

8.  Efficiency of a self-aminoacylating ribozyme: effect of the length and base-composition of its 3' extension.

Authors:  Jean Lehmann; Amy Reichel; Axel Buguin; Albert Libchaber
Journal:  RNA       Date:  2007-06-07       Impact factor: 4.942

9.  Evolutionary patterns of non-coding RNAs.

Authors:  Athanasius F Bompfünewerer; Christoph Flamm; Claudia Fried; Guido Fritzsch; Ivo L Hofacker; Jörg Lehmann; Kristin Missal; Axel Mosig; Bettina Müller; Sonja J Prohaska; Bärbel M R Stadler; Peter F Stadler; Andrea Tanzer; Stefan Washietl; Christina Witwer
Journal:  Theory Biosci       Date:  2005-04       Impact factor: 1.919

10.  Aminoacylating urzymes challenge the RNA world hypothesis.

Authors:  Li Li; Christopher Francklyn; Charles W Carter
Journal:  J Biol Chem       Date:  2013-07-18       Impact factor: 5.157

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