Literature DB >> 21930581

The meaning of a minuscule ribozyme.

Michael Yarus1.   

Abstract

The smallest ribozyme that carries out a complex group transfer is the sequence GUGGC-3', acting to aminoacylate GCCU-3' (and host a manifold of further reactions) in the presence of substrate PheAMP. Here, I describe the enzymatic rate, the characterization of about 20 aminoacyl-RNA and peptidyl-RNA products and the pathways of these GUGGC/GCCU reactions. Finally, the topic is evolution, and the potential implications of these data for the advent of translation itself.

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Year:  2011        PMID: 21930581      PMCID: PMC3158920          DOI: 10.1098/rstb.2011.0139

Source DB:  PubMed          Journal:  Philos Trans R Soc Lond B Biol Sci        ISSN: 0962-8436            Impact factor:   6.237


  18 in total

1.  A general method for rapid and nondenaturing purification of RNAs.

Authors:  Jeffrey S Kieft; Robert T Batey
Journal:  RNA       Date:  2004-06       Impact factor: 4.942

2.  Specific, rapid synthesis of Phe-RNA by RNA.

Authors:  M Illangasekare; M Yarus
Journal:  Proc Natl Acad Sci U S A       Date:  1999-05-11       Impact factor: 11.205

3.  Ribozyme-catalyzed aminoacylation from CoA thioesters.

Authors:  Na Li; Faqing Huang
Journal:  Biochemistry       Date:  2005-03-22       Impact factor: 3.162

Review 4.  Origins of the genetic code: the escaped triplet theory.

Authors:  Michael Yarus; J Gregory Caporaso; Rob Knight
Journal:  Annu Rev Biochem       Date:  2005       Impact factor: 23.643

5.  Aminoacyl-RNA synthesis catalyzed by an RNA.

Authors:  M Illangasekare; G Sanchez; T Nickles; M Yarus
Journal:  Science       Date:  1995-02-03       Impact factor: 47.728

6.  A tiny RNA that catalyzes both aminoacyl-RNA and peptidyl-RNA synthesis.

Authors:  M Illangasekare; M Yarus
Journal:  RNA       Date:  1999-11       Impact factor: 4.942

7.  Transacylation rates of (aminoacyl)adenosine moiety at the 3'-terminus of aminoacyl transfer ribonucleic acid.

Authors:  M Taiji; S Yokoyama; T Miyazawa
Journal:  Biochemistry       Date:  1983-06-21       Impact factor: 3.162

8.  Essential structures of a self-aminoacylating RNA.

Authors:  M Illangasekare; O Kovalchuke; M Yarus
Journal:  J Mol Biol       Date:  1997-12-12       Impact factor: 5.469

9.  Catalyzed and spontaneous reactions on ribozyme ribose.

Authors:  Rebecca M Turk; Mali Illangasekare; Michael Yarus
Journal:  J Am Chem Soc       Date:  2011-03-25       Impact factor: 15.419

10.  Oligoribonucleotide synthesis using T7 RNA polymerase and synthetic DNA templates.

Authors:  J F Milligan; D R Groebe; G W Witherell; O C Uhlenbeck
Journal:  Nucleic Acids Res       Date:  1987-11-11       Impact factor: 16.971

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  22 in total

1.  A realistic model under which the genetic code is optimal.

Authors:  Harry Buhrman; Peter T S van der Gulik; Gunnar W Klau; Christian Schaffner; Dave Speijer; Leen Stougie
Journal:  J Mol Evol       Date:  2013-07-23       Impact factor: 2.395

2.  The chemical origins of life and its early evolution: an introduction.

Authors:  David M J Lilley; John Sutherland
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2011-10-27       Impact factor: 6.237

3.  When Competing Viruses Unify: Evolution, Conservation, and Plasticity of Genetic Identities.

Authors:  Luis P Villarreal; Guenther Witzany
Journal:  J Mol Evol       Date:  2015-05-27       Impact factor: 2.395

4.  In the Beginning was a Mutualism - On the Origin of Translation.

Authors:  Marko Vitas; Andrej Dobovišek
Journal:  Orig Life Evol Biosph       Date:  2018-04-30       Impact factor: 1.950

5.  The 3-Minihelix tRNA Evolution Theorem.

Authors:  Zachary F Burton
Journal:  J Mol Evol       Date:  2020-02-04       Impact factor: 2.395

6.  Darwinian behavior in a cold, sporadically fed pool of ribonucleotides.

Authors:  Michael Yarus
Journal:  Astrobiology       Date:  2012-09-04       Impact factor: 4.335

7.  Toward major evolutionary transitions theory 2.0.

Authors:  Eörs Szathmáry
Journal:  Proc Natl Acad Sci U S A       Date:  2015-04-02       Impact factor: 11.205

Review 8.  Social Networking of Quasi-Species Consortia drive Virolution via Persistence.

Authors:  Luis P Villarreal; Guenther Witzany
Journal:  AIMS Microbiol       Date:  2021-04-30

9.  The RNA world hypothesis: the worst theory of the early evolution of life (except for all the others)(a).

Authors:  Harold S Bernhardt
Journal:  Biol Direct       Date:  2012-07-13       Impact factor: 4.540

10.  A ribonucleotide Origin for Life--fluctuation and near-ideal reactions.

Authors:  Michael Yarus
Journal:  Orig Life Evol Biosph       Date:  2013-01-24       Impact factor: 1.950

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