Literature DB >> 501742

The formation of dipeptides from amino acids and the 2'(3')-glycyl ester of an adenylate.

A L Weber, L E Orgel.   

Abstract

The yields of dipeptide obtained from the reaction of 0.2M 2'(3')-O-(glycyl)-adenosine-5'-(O-methylphosphate) and 0.2M amino acid at pH 8.2 ranged from 0.1% to 35.5% for a group of 15 amino acids. The yields of glyser (35.3%), gly-cys (11.8%) and gly-thr (5.4%) were considerably greater than dipeptide yields obtained from any of the other 12 amino acids (less than or equal to 1.7%). Aminolysis of 0.05M 2'(3')-O-(glycyl)-adenosine-5-'-(O-methylphosphate) by 0.4M serine ethyl ester yielded 53% glycylserine diketopiperazine, via N-(glycyl)-serine ethyl ester as a transient intermediate. The prebiotic significance of these reactions is discussed.

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Year:  1979        PMID: 501742     DOI: 10.1007/bf01739478

Source DB:  PubMed          Journal:  J Mol Evol        ISSN: 0022-2844            Impact factor:   2.395


  11 in total

1.  THE MECHANISM OF HYDROLYSIS OF AMINO ACYL RNA.

Authors:  R WOLFENDEN
Journal:  Biochemistry       Date:  1963 Sep-Oct       Impact factor: 3.162

2.  N, N'-carbonyldiimidazole-induced diketopiperazine formation in aqueous solution in the presence of adenosine-5'-monophosphate.

Authors:  A Brack; K W Ehler; L E Orgel
Journal:  J Mol Evol       Date:  1976-12-30       Impact factor: 2.395

3.  Amino acid activation with adenosine 5'-phosphorimidazolide.

Authors:  A L Weber; L E Orgel
Journal:  J Mol Evol       Date:  1978-05-12       Impact factor: 2.395

4.  The formation of peptides from the 2'(3')-glycyl ester of a nucleotide.

Authors:  A L Weber; L E Orgel
Journal:  J Mol Evol       Date:  1978-08-02       Impact factor: 2.395

5.  On the chemical reactivity of aminoacyl-tRNA ester bond. I. Influence of pH and nature of the acyl group on the rate of hydrolysis.

Authors:  F Schuber; M Pinck
Journal:  Biochimie       Date:  1974       Impact factor: 4.079

6.  Reaction of tris-(hydroxymethyl)-aminomethane with valyl-TYMV-RNA.

Authors:  M Pinck; F Schuber
Journal:  Biochimie       Date:  1971       Impact factor: 4.079

7.  A specific and sensitive assay for disulfides.

Authors:  W L Zahler; W W Cleland
Journal:  J Biol Chem       Date:  1968-02-25       Impact factor: 5.157

Review 8.  Amino acid esters of RNA, nucleosides and related compounds.

Authors:  H G Zachau; H Feldmann
Journal:  Prog Nucleic Acid Res Mol Biol       Date:  1965

9.  The general synthetic route to amino acid esters of nucleotides and nucleoside-5'-triphosphates and some properties of these compounds.

Authors:  B P Gottikh; A A Krayevsky; N B Tarussova; P P Purygin; T L Tsilevich
Journal:  Tetrahedron       Date:  1970-09       Impact factor: 2.457

10.  On the chemical reactivity of aminoacyl-tRNA ester bond. 2. Aminolysis by tris and diethanolamine.

Authors:  F Schuber; M Pinck
Journal:  Biochimie       Date:  1974       Impact factor: 4.079

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  11 in total

1.  The ribosome as an entropy trap.

Authors:  Annette Sievers; Malte Beringer; Marina V Rodnina; Richard Wolfenden
Journal:  Proc Natl Acad Sci U S A       Date:  2004-05-12       Impact factor: 11.205

Review 2.  Ribosome evolution: emergence of peptide synthesis machinery.

Authors:  Koji Tamura
Journal:  J Biosci       Date:  2011-12       Impact factor: 1.826

Review 3.  Modulating the activity of the peptidyl transferase center of the ribosome.

Authors:  Malte Beringer
Journal:  RNA       Date:  2008-03-27       Impact factor: 4.942

4.  Stereoselective formation of a 2'(3')-aminoacyl ester of a nucleotide.

Authors:  A L Weber
Journal:  J Mol Evol       Date:  1987       Impact factor: 2.395

Review 5.  The origin of polynucleotide-directed protein synthesis.

Authors:  L E Orgel
Journal:  J Mol Evol       Date:  1989-12       Impact factor: 2.395

6.  A tiny RNA that catalyzes both aminoacyl-RNA and peptidyl-RNA synthesis.

Authors:  M Illangasekare; M Yarus
Journal:  RNA       Date:  1999-11       Impact factor: 4.942

Review 7.  Experimental studies related to the origin of the genetic code and the process of protein synthesis--a review.

Authors:  J C Lacey; D W Mullins
Journal:  Orig Life       Date:  1983-03

8.  Diketopiperazine-mediated peptide formation in aqueous solution.

Authors:  M Nagayama; O Takaoka; K Inomata; Y Yamagata
Journal:  Orig Life Evol Biosph       Date:  1990       Impact factor: 1.950

9.  Poly(U)-directed peptide-bond formation from the 2'(3')-glycyl esters of adenosine derivatives.

Authors:  A L Weber; L E Orgel
Journal:  J Mol Evol       Date:  1980-09       Impact factor: 2.395

10.  Evaluation and Application of Dimethylated Amino Acids as Isobaric Tags for Quantitative Proteomics of the TGF-β/Smad3 Signaling Pathway.

Authors:  Qing Yu; Xudong Shi; Tyler Greer; Christopher B Lietz; K Craig Kent; Lingjun Li
Journal:  J Proteome Res       Date:  2016-08-10       Impact factor: 4.466

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